Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0779 ATGGTGAACGCGATGGAGTGGCAGAAGCAGCGTTGTTGGCAACCAAACAGAAACGCGGAAATGATGTGCGTGAAAGTGATGACCGACGAACAGCTCGAGATTCTGCGCAAACAGATTGCGGTTTACGCAACAATCTGCGAACAACTCATCGAGATGCACAAAAACATCTCTGCACACCAAGATCTCGCAGGTATTAGGCTGGGGAATATGTATTGTGATCCATTGTTGGGGTCTGGTGGTCTCAAAATAGCTTCAAGGCAGCGGTGGACTCCAACTGCTATGCAGCTTCAGATTCTGGAGCGAATATTTGATCAAGGGATTGGGACTCCCACCAAGGAAAAGATCAAGGAGATCACTAATGAGCTCAGCCAGCATGGTCAGATTTCTGAGACCAATGTGTATAATTGGTTCCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCGCCTAGTGCTAATGCTGAATCAGAAGTGGAGACTGAGGTTGATTCTAAGGATAAGAAGACAAAGCCGGACGAATTTCAGGCCCCTCCTAGCGTTTCTGCTGGGCCTGCTGATAATTTAGGCTTCCAGAACCATGATAGTTTGCAGTACTTGAATCCAGAATCCAACAAACCAGATTCTGTCTTCCCGTCTGATGGGACCAGAAATTTTCATCATGTGCCTGCTTTTGATGGGCTGCTATCAAACTCAAGGAGCAACTATCTTACTGGAAAACTGGAAACACCTGAGAACTACGAATTATACCAGCCAGCAGGTGACTACAACATTGCAGTCCTCTGCTCCTTAGGTCAACCTCCAATTTGTCCGCACATTCCTGACGTGACACCAGCTGTTAAGAAACAAAATGATCAGAGACGAGCAATTTAG 879 0.4687 MVNAMEWQKQRCWQPNRNAEMMCVKVMTDEQLEILRKQIAVYATICEQLIEMHKNISAHQDLAGIRLGNMYCDPLLGSGGLKIASRQRWTPTAMQLQILERIFDQGIGTPTKEKIKEITNELSQHGQISETNVYNWFQNRRARSKRKQQNVAPSANAESEVETEVDSKDKKTKPDEFQAPPSVSAGPADNLGFQNHDSLQYLNPESNKPDSVFPSDGTRNFHHVPAFDGLLSNSRSNYLTGKLETPENYELYQPAGDYNIAVLCSLGQPPICPHIPDVTPAVKKQNDQRRAI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0779 292 ProSiteProfiles 'Homeobox' domain profile. 82 147 IPR001356 GO:0003677
Gso2g0779 292 Pfam Homeodomain 86 146 IPR001356 GO:0003677
Gso2g0779 292 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
Gso2g0779 292 Gene3D - 87 152 - -
Gso2g0779 292 CDD homeodomain 86 148 IPR001356 GO:0003677
Gso2g0779 292 SMART HOX_1 84 151 IPR001356 GO:0003677
Gso2g0779 292 MobiDBLite consensus disorder prediction 144 217 - -
Gso2g0779 292 MobiDBLite consensus disorder prediction 188 214 - -
Gso2g0779 292 PANTHER - 3 261 - -
Gso2g0779 292 MobiDBLite consensus disorder prediction 161 176 - -
Gso2g0779 292 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 261 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0779 Gso-Chr2 8317979 8322842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0779 22 261 Wox Gene Family AT4G35550 51.822 4.16e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso2g0779 Homeodomain 3.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0779 - - gmx:100527354 586.645