Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0773 ATGGATAATTATGGATCATCTTCTCCTTACCGGTATCCAAGCCCATATATGTACCCTCCCAATCCTCATCAACCGTACCCTCCTCCTCCAGGTTCAGCTCCTGATCCATATGCACAGCATGTTCCTTATCAACCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCCTATCCTCCACCTCCTAGACCTTCCTCACATTCTGGCCATTTTGAGTATTCCTATACTCCTCCTCCTCACCCTTCTGATTTTCCCTACCCCCCTCCACCTTATTATGCTCATCCTCCATCTTATCCTTATCCCTACCATGTTCCTCCACCAAATCATGATCCTTCCAAGCCTTCCCTTTCATACCATGCTAGTTTCCAACATGGATCATCTCATTATTATTATCAACAACCAAACCAGGCCTATTCAGCTTCGGCTCCTGAAGTCCAACCTGATATCCACTCGCACACCAATAGCTACTCTGGTCCCTACTGGCAGGAGAACACAAGCACTGCAGCAGATGAAGTGTCACAAGCTAGTGATAGTTCCAAGCCTTCTCAGGGTTCTGCTTACCCGCCTTTGGATGATCTTATGAGCAATGTTCGGTTGTCTGATGGCCAGCCAACTGCTCCTGCATCGCCACCTGCACCTGCAAGGCAACCATTTATGCATTCCATTTCAGTTCCAAAGTTGCAACAGAAGAGAGAGGAATTTTATGGATATTCGAATAACTCCTTCTCGGGGTGGGGATCCTCCTACCACAGTCAGGTTGATTCGTCTAGGCTTTCTGATTTTTCTGGCTCATTTAATGAATCAATGCATAGTCAGAGTTTGCAGATTGTTCCAGTGCAGAATAAAGGGTCCTTGAGAGTTTTGCTGCTACATGGAAATTTAGATATATGGATCCATGAAGCCAAGAACCTTCCAAATATGGACATGTTTCACAAAACATTAGGAGATATGTTTGGTAAATTACCTGGTAGTGTGGGCAATAAAATTGAAGGAACTATGAATAAGAAGATTACTAGTGATCCTTATGTATCAATTTCAGTATCCAATGCTGTTATTGGGAGGACTTACGTCATTAGCAACTCCGAAAATCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCGTATCATGCTGCTGAAGTGCACTTTCTTGTTAAAGACAACGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTGGAGCAAATATACTCAGGAGCAGTAGTTGAAGGAACCTTTCCTATCCTGAATAATAATGGGAAGCCTTGTAAGCAAGGTGCTGTCCTGACCCTATCCATTCAGTACATACCTATGGAGAAATTGAGCATTTATCACCAAGGAGTTGGAGCAGGGCCAGAATACATTGGGGTTCCTGGCACATATTTTCCTTTGAGGAGGGGTGGAACCGTTACTCTGTACCAAGATGCTCATGTTCCAGATGGCAGCCTCCCTAATGTGTTGCTTGACAGTGGGATGTATTATGTGAATGGAAAGTGTTGGCAAGATATCTTTGATTCCATAAGTCAAGCTCGGCGTTTGATTTATATTACAGGATGGTCTGTGTGGCACAAAGTAAGGTTGGTTAGGGATGCTGCTGGTTATGCTTCAGATTATACCTTGGGTGATCTTGTAAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATCTGGGATGATCCTACGTCAAGAAGCATTTTTGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGTAGATTTTTTAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCTCGCAGTGGCAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCATCAGAAAACCGTGATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCCACCATCCTCTTTTTAGAACATTGAATACAATACATAAGGATGACTACCACAACCCTACTTTTACGGGTAATATTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCGAAACCTCACGGGATTAAAAAGTTGAAAATTTCATATGATGATGCTTTGCTAAGGCTGGAAAGAATTCCAGATGTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATAATCCTGAAGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCCGTTAAGGGGTTTCCAAAGGATCCAAAAGATGCAACGAGCAAGAACCTAGTTTGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTTAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCTTACAATTGGAGTCAACATAAAGACCTAGGTGCTAATAACTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATAAAAGCAAACGAGAGATTTGCAGTGTATGTTGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGGGCTGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCAGGGCTTGAAGCTGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGCCATGAATTTGTATGATAATGCCGGTGTGACTGGAGCTCCTCCCCCAGCAAATAGTCCACAAGCAGCCAGCCGAAATAGCCAACGCTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAACGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCTTATCAACCTCATCATACGTGGGCAAGAAAACAATCTTATCCACATGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACAGGAACAATTGAAGAGTGCTTTTTGCAACCCGAGAGCCTTGAATGTGTAAGAAGGGTTAAAGCAATGGGTGAAATGAACTGGAAACAATTTTCAGCTAAGGAAGCAACAGAGATGAAAGGGCATCTACTGAAATACCCGGTAGAAGTTGATCGAAATGGCAAGGTTAGACCCCTTCAGGACTGTGAAGAGTTCCCGGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCTATGAAGGAGAACCTAACCATTTGA 3321 0.4207 MDNYGSSSPYRYPSPYMYPPNPHQPYPPPPGSAPDPYAQHVPYQPYPYLSSHSFNYSYPPPPRPSSHSGHFEYSYTPPPHPSDFPYPPPPYYAHPPSYPYPYHVPPPNHDPSKPSLSYHASFQHGSSHYYYQQPNQAYSASAPEVQPDIHSHTNSYSGPYWQENTSTAADEVSQASDSSKPSQGSAYPPLDDLMSNVRLSDGQPTAPASPPAPARQPFMHSISVPKLQQKREEFYGYSNNSFSGWGSSYHSQVDSSRLSDFSGSFNESMHSQSLQIVPVQNKGSLRVLLLHGNLDIWIHEAKNLPNMDMFHKTLGDMFGKLPGSVGNKIEGTMNKKITSDPYVSISVSNAVIGRTYVISNSENPVWLQHFYVPVAYHAAEVHFLVKDNDIVGSQLIGIVAIPVEQIYSGAVVEGTFPILNNNGKPCKQGAVLTLSIQYIPMEKLSIYHQGVGAGPEYIGVPGTYFPLRRGGTVTLYQDAHVPDGSLPNVLLDSGMYYVNGKCWQDIFDSISQARRLIYITGWSVWHKVRLVRDAAGYASDYTLGDLVKSKSQEGVRVLLLIWDDPTSRSIFGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTIHKDDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDAPSVGEDNPEVWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAMNLYDNAGVTGAPPPANSPQAASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSYPHGQIHGYRMSLWAEHTGTIEECFLQPESLECVRRVKAMGEMNWKQFSAKEATEMKGHLLKYPVEVDRNGKVRPLQDCEEFPDVGGKIVGSFLAMKENLTI* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0773 1106 SUPERFAMILY Phospholipase D/nuclease 783 1038 - -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 59 79 - -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 138 185 - -
Gso2g0773 1106 Gene3D Endonuclease Chain A 495 731 - -
Gso2g0773 1106 PANTHER PHOSPHOLIPASE D ALPHA 1 192 1106 - -
Gso2g0773 1106 PANTHER PHOSPHOLIPASE D 192 1106 IPR015679 -
Gso2g0773 1106 SMART C2_3c 293 415 IPR000008 -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 99 120 - -
Gso2g0773 1106 Gene3D C2 domain 287 431 IPR035892 -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 13 36 - -
Gso2g0773 1106 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 617 652 IPR001736 GO:0003824
Gso2g0773 1106 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 290 441 IPR035892 -
Gso2g0773 1106 SUPERFAMILY Phospholipase D/nuclease 496 716 - -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 138 218 - -
Gso2g0773 1106 CDD C2_plant_PLD 287 439 - -
Gso2g0773 1106 Pfam Phospholipase D Active site motif 953 979 IPR001736 GO:0003824
Gso2g0773 1106 Pfam Phospholipase D Active site motif 618 652 IPR001736 GO:0003824
Gso2g0773 1106 Pfam Phospholipase D C terminal 1026 1096 IPR024632 -
Gso2g0773 1106 Pfam C2 domain 292 418 IPR000008 -
Gso2g0773 1106 ProSiteProfiles C2 domain profile. 270 416 IPR000008 -
Gso2g0773 1106 MobiDBLite consensus disorder prediction 1 44 - -
Gso2g0773 1106 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 952 979 IPR001736 GO:0003824
Gso2g0773 1106 SMART pld_4 952 979 IPR001736 GO:0003824
Gso2g0773 1106 SMART pld_4 617 652 IPR001736 GO:0003824
Gso2g0773 1106 Gene3D Endonuclease Chain A 765 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0773 Gso-Chr2 8237088 8245559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0773 66 1106 Phospholipase D Gene Family (Wang group) AT2G42010 68.831 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0773 K01115 - gmx:100791059 2122.44