Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0746 ATGGCATTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAAGATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCAAAGGCATTGGCAAGGCCTGCATCTTACACGACCAAGTATTTTGGTTGTGAACTTGGGGCCCAGTCGAAATTTGATGAGAAGACTGGAACTTCTCACGTCAATGGAGCACATGATACTACTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATCACTAAGAACCAAATGATCCAGCTGAAATGCGCTGCTTGTGGTTTTATGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACAGAAGGAAGGTGAATTAGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCTTCTAAGGATGGCACTGCTAAATCAACCTCTTCTAAGAAAAAAGCAAGTGGCTCTGATGAAGACCGCACTTCACCTACTCACAGTCAAATTGACGAGAAAGAGGAGGCTCCAGATGAAGATGATGACGACGACGTGCAATGGCTGACAGATACATCACTTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGAAGAAGAAAAAAACAGTAAGTAACGGAAATGGTGGTTCTCACAATGGTAACTCAATGCACTACGGGACCCTGGTTGGTGAAGTGAAAGCAAATTTGAAGAAAGGTGTTGGGGCAAATGAATTGCTGTCCCATCTTGCAGCACTTCCTGCACCTGCTCAAGAAAAGATGAGTGCACTGGTTGAAGCTCTATTTGATGGAATTGATAAAGGTTTTGCTAAAGAAGCTGATAAGAAGAAGAACTACTTTGCTGCTGCTGTTGCCGAGGAGGGATCCCAGCTGTTATTGCTTCATGCTATTGAAGAATTTTCTTGCAAGTCTACTTCCAATGCTTTAAAGGAGGTTGCCCTGGTTCTAAAGGCATTCTACGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCTAAGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAGTGCAGAATCAGAAACCGAGGAAGAATAA 1326 0.4246 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTTKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFMSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERQKEGELADEEQKKVKKEVKKKGSSSSKDGTAKSTSSKKKASGSDEDRTSPTHSQIDEKEEAPDEDDDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTDEPEKKKKTVSNGNGGSHNGNSMHYGTLVGEVKANLKKGVGANELLSHLAALPAPAQEKMSALVEALFDGIDKGFAKEADKKKNYFAAAVAEEGSQLLLLHAIEEFSCKSTSNALKEVALVLKAFYDADVLEEEHIVQWYQKGLKGDNKNSKIWKNAQPFIDWLQSAESETEEE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0746 441 MobiDBLite consensus disorder prediction 147 236 - -
Gso2g0746 441 Gene3D - 289 432 - -
Gso2g0746 441 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Gso2g0746 441 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 441 IPR003307 GO:0005515
Gso2g0746 441 MobiDBLite consensus disorder prediction 268 288 - -
Gso2g0746 441 Gene3D - 105 145 - -
Gso2g0746 441 CDD W2_eIF5 325 439 - -
Gso2g0746 441 ProSiteProfiles W2 domain profile. 285 441 IPR003307 GO:0005515
Gso2g0746 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 441 IPR045196 GO:0003743|GO:0006413
Gso2g0746 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 441 - -
Gso2g0746 441 Coils Coil 159 179 - -
Gso2g0746 441 SMART 542_3 350 437 IPR003307 GO:0005515
Gso2g0746 441 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Gso2g0746 441 MobiDBLite consensus disorder prediction 148 224 - -
Gso2g0746 441 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Gso2g0746 441 Gene3D - 2 104 - -
Gso2g0746 441 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Gso2g0746 441 SUPERFAMILY ARM repeat 292 435 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0746 Gso-Chr2 7938916 7941512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0746 1 434 Eukaryotic Initiation Factors Gene Family AT1G77840 64.091 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0746 K03262 - gmx:100778073 780.015