Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0737 ATGCGGGTGGTCTCTAATCGGGTGCCTCAAAATCATCAAGATAGAGAGGAGGAGAAACTCCGATCATTCTGGGAGAAGCAGTTACTTAATATTCAAATTGCTGAAGCATTTAAGAGCCAGCAAAAGTTGCCGCTAGCTAGAATCAGAAGGATGATGAAATCAGAGCCCGGAGTTCAGATGATCAGTTCTGAAATCCCCATGCTGATGTCAAAAGCATGTGAGATTTTCATTCAGGAGCTCACTTTTCGTGCTTGGATGCATGCTGAAAAGAACAACAAGAGTATTGTGCAGCCTTGTGACGTTGCCAAAGTTATCATGCAAACTGATACCATGAATTTCCTCACTGAGATTATTCCAAACAACCTCGGCGATTTCAGTGTTTTTGATGCCAAGGTATCTTCATTCTTTTCTTCTTCTTTCGTTTCCAGTTACACCTTCCACATTCATTCAATGACTTCCTTAATTTACCATCTATGA 477 0.4109 MRVVSNRVPQNHQDREEEKLRSFWEKQLLNIQIAEAFKSQQKLPLARIRRMMKSEPGVQMISSEIPMLMSKACEIFIQELTFRAWMHAEKNNKSIVQPCDVAKVIMQTDTMNFLTEIIPNNLGDFSVFDAKVSSFFSSSFVSSYTFHIHSMTSLIYHL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0737 158 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 10 121 - -
Gso2g0737 158 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 10 121 IPR027170 GO:0003700|GO:0006355|GO:0016602
Gso2g0737 158 Gene3D Histone, subunit A 3 120 IPR009072 GO:0046982
Gso2g0737 158 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 42 104 IPR003958 -
Gso2g0737 158 SUPERFAMILY Histone-fold 20 114 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0737 Gso-Chr2 7778784 7780836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0737 20 121 CCAAT-HAP5 Transcription Factor Family AT1G56170 46.078 3.51e-28 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gso2g0737 CBFD_NFYB_HMF 2.6e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0737 - K08066 gsj:114370134 285.419