Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0724 ATGAAAGGGCAGAGTAGAGAATTTCTTGAGTCCGGTTCCTCATCGGTGGTCTCAAACGCGGTTCAGCAGCGCCTCCAATTCATTCTGCAGAGCCGTCCCGAGTGGTGGGTATATGCCATCTTCTGGCAAGCCACGAAAGACAGTGATTCGCGTCTCAAATTAGAATATGGCGACGGCTACTTTCGGGGCAAAGAGGAGAAGGAAGAGGAACAAACGAGGAACGTGAACGACATCGAATGGTTCTACAGAATGTCGCAAACTCGGTCGTATGTTGCCGGGGACGGTGTGGTTGGGTGTGCCTACAGCTCAGGGGTAGATGTTTGGTTGAGCGGAGTGAACGAGTTTGAACTGAATGACTGTGACGACAGAGTAAGGGAAGCTCGTAGTCACGGGATCCACACATTGGTCTGCGTCTATGTGCCAGGTGGCATCCTTGAGCTGGGTTCGTGTCACGTCTTCACTCTCGGATACGGCCTTCTGGAAATGGCGAAATCAGTGTTTGAGGAAAGTCAGAATCAGAATCCACTTAACAACCCCATGGGCATGAATGATGCAACTGCTGCTAAGGTTGATGGATCGTCCACAGACTCTTCTGATGCGGATGCGGATGCTACTTTCCCGATGACGAGAAGGGGAGGAGGGAGGGCACGTGAGGCGCTGCCTATGAATCACGTGGAAGCTGAGAGGCAACGGCGAGAGAAGCTGAACCAGCGATTCTACACTCTTCGCTCAGCGGTCCCCAACGTGTCCAAGATGGACAAAGCCTCTGCTTTTGGACGCTGTTGA 786 0.5254 MKGQSREFLESGSSSVVSNAVQQRLQFILQSRPEWWVYAIFWQATKDSDSRLKLEYGDGYFRGKEEKEEEQTRNVNDIEWFYRMSQTRSYVAGDGVVGCAYSSGVDVWLSGVNEFELNDCDDRVREARSHGIHTLVCVYVPGGILELGSCHVFTLGYGLLEMAKSVFEESQNQNPLNNPMGMNDATAAKVDGSSTDSSDADADATFPMTRRGGGRAREALPMNHVEAERQRREKLNQRFYTLRSAVPNVSKMDKASAFGRC* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0724 261 Pfam Helix-loop-helix DNA-binding domain 223 256 IPR011598 GO:0046983
Gso2g0724 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 261 IPR011598 GO:0046983
Gso2g0724 261 MobiDBLite consensus disorder prediction 188 202 - -
Gso2g0724 261 PANTHER MYC 16 256 IPR045084 GO:0003700|GO:0006355
Gso2g0724 261 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 68 167 IPR025610 -
Gso2g0724 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 256 IPR036638 GO:0046983
Gso2g0724 261 Gene3D - 214 259 IPR036638 GO:0046983
Gso2g0724 261 MobiDBLite consensus disorder prediction 185 214 - -
Gso2g0724 261 PANTHER TRANSCRIPTION FACTOR MYC2-LIKE 16 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0724 Gso-Chr2 7606905 7607690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0724 13 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 32.584 3.81e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso2g0724 bHLH-MYC_N 1.8e-18 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0724 - - gsj:114370107 526.168