Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0715 ATGTCTCTTCATTGGTGTTGCTTTGTGTGTCTCTTTCTTTTGGTGGGATTGAGAGCAGAGGTAGCTAATGCTCAGTTTTATAGAAATGTTGGAAATAAACATTTACCTTACTGGTCAATAGTGGTGGATCAATCAGGGCATGGAAACTTCTCTACCATACAATCTGCCATTGATTCAGTGCCTTCTAATAACAGGTATTGGGTTTCTATCAAGGTGAAGGCAGGTACATACAGAGAAAAAGTGAAGATTCCTTACGATAAGCCTTTCATCATACTAAAAGGGGAGGGAAAGAGGAGAACTTTAGTTGAGTGGGATGATCACAATGATATTTCTCAGAGCCCTACGTTTGCAGCCATGGCTGACAATCTTGTTGTCAAATGCATGAGCTTTAGGAACTCATACAACAATCCAATAAATAATAAACACGAGAATGTGCCTGCTGTGGCTGCGATGGTAAGTGGCGACAAGGCTTATTTTTTCAGAGTTGGTTTCTTTGGTGTACAAGACACTTTATGGGATGTTGCAGGAAGACATTACTACATGCTTTGTACCATGCAAGGTGCTGTTGATTTTATCTTTGGTGCTGCCCAATCTTTATTTGAGAGGTGTTCCATATCTGTTATTGGTGGGGCCCTAGCTCCGGGCCTCTCGGGTTTTATTACAGCACAAGGCAGAGAAAATTCACAAGATGCAAATGGGTTTGTTTTCAAAGACTGCCATGTGTTCGGAAGTGGGTCGAGTTACTTGGGGAGGCCTTGGAGAAGTTATGCCAGGGTTTTGTTCTACAACACCACCATGACCAACGTTGTACAACCTAGTGGTTGGACTTCATCGGATTTTGCTGGATATGAGGGTCGCATAACATTTGCAGAGTATGGAAATTTTGGGCCAGGTTCTGACCCTTCTAAGCGAGTGAGTTGGACCAAGAAGTTGGATTTGAAAACAATTGAGAACATGGCAAGCCTCAAGTTCATTGACACTGAAGGTTGGCTTCAAAACCAACAGTTCTAA 1011 0.4243 MSLHWCCFVCLFLLVGLRAEVANAQFYRNVGNKHLPYWSIVVDQSGHGNFSTIQSAIDSVPSNNRYWVSIKVKAGTYREKVKIPYDKPFIILKGEGKRRTLVEWDDHNDISQSPTFAAMADNLVVKCMSFRNSYNNPINNKHENVPAVAAMVSGDKAYFFRVGFFGVQDTLWDVAGRHYYMLCTMQGAVDFIFGAAQSLFERCSISVIGGALAPGLSGFITAQGRENSQDANGFVFKDCHVFGSGSSYLGRPWRSYARVLFYNTTMTNVVQPSGWTSSDFAGYEGRITFAEYGNFGPGSDPSKRVSWTKKLDLKTIENMASLKFIDTEGWLQNQQF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0715 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 335 - -
Gso2g0715 336 Pfam Pectinesterase 40 326 IPR000070 GO:0030599|GO:0042545
Gso2g0715 336 Gene3D - 38 336 IPR012334 -
Gso2g0715 336 PANTHER PECTINESTERASE 10-RELATED 18 335 - -
Gso2g0715 336 SUPERFAMILY Pectin lyase-like 39 332 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0715 Gso-Chr2 7464949 7469026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0715 39 284 Carbohydrate Esterase AT2G19150 42.915 8.12e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0715 - - gmx:100819252 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1470 7 32666647 32676954 Gso2g0715 2 7464949 7469026 GST