Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0714 ATGTATCTTGGTTGGTATCTTTTGACATTTTTCTTTTTTTTGACGAGTGTTAAAATAGTGTTAGTGCATGCTAATCACAATCATCATCACCATCATCATCACGAACAAAGAAACAATAAACAAATTGCAAACAAAACATCCCATTCTTCTTCCGGGACAATTATTGTGGACTTATCGGGGAATGGAGACTTCTCTACGATACAATCTGCTATTGATTCAATTTCTTCTGACAACAAGAATTGGGTTTATATCTATGTGAAGGCAGGCACCTACAGGGAAAAGGTGAAGATCAGTTTTGACAAGCCTTTCATCGTACTAGAAGGCGAGGGACAAAAGAACACTTTTGTTGAGTGGGATGACCATGATTCAAGTGCAGAGAGTCCTACGTTCACAACCATGGCTGACAATGTTGTCGTCAAGTCCATTAGCTTTAGGAAGATCCTGATTGATCCTGTTAAATATAGTGCATACTTCTATGACGTTGGCTTCTTTGGTTTGCAAGACACTCTGTGGGATGAACAAGGAAGACATTACTTCAAGTCTTGTACAATTCAAGGTGCTGTGGATTTTATCTTCGGCACTGCCCAATCTTTATATGAGGACTGTACCATATCCGCTATTGATGCTAATCTTGGTCCTGGCATTATTGGTTTTATCACCGCACAAGGGAGAACAGATCCAAACGATTCAAATGGGTTTGTTTTTAAGCAATGCAATATCATTGGAAATGGTACAACTTACTTGGGAAGACCATGGAGAGGTTATGCTAGAGTTATTTTCTATAATACTAAAATGTCCAACATTATACAACCATTAGGTTGGCAGCCATGGGGCTTCGCTGGCCAAGAGGATCACATAACATTCGCTGAGTATGGGAATTCTGGACCTGGTTCTGACACTTCCAAGCGAGTAAGTTGGTTAAAGAATTTGGATTCATCAACCGTTAGTAAGATGGCAAGTACTAGCTTCATTGGCACCGATGGTTGGCTAAAGACCCTGACGCAGCTCTAA 1011 0.4026 MYLGWYLLTFFFFLTSVKIVLVHANHNHHHHHHHEQRNNKQIANKTSHSSSGTIIVDLSGNGDFSTIQSAIDSISSDNKNWVYIYVKAGTYREKVKISFDKPFIVLEGEGQKNTFVEWDDHDSSAESPTFTTMADNVVVKSISFRKILIDPVKYSAYFYDVGFFGLQDTLWDEQGRHYFKSCTIQGAVDFIFGTAQSLYEDCTISAIDANLGPGIIGFITAQGRTDPNDSNGFVFKQCNIIGNGTTYLGRPWRGYARVIFYNTKMSNIIQPLGWQPWGFAGQEDHITFAEYGNSGPGSDTSKRVSWLKNLDSSTVSKMASTSFIGTDGWLKTLTQL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0714 336 SUPERFAMILY Pectin lyase-like 49 332 IPR011050 -
Gso2g0714 336 ProSitePatterns Pectinesterase signature 1. 78 97 IPR018040 -
Gso2g0714 336 PANTHER PECTINESTERASE 10-RELATED 33 333 - -
Gso2g0714 336 Gene3D - 47 335 IPR012334 -
Gso2g0714 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 333 - -
Gso2g0714 336 Pfam Pectinesterase 54 325 IPR000070 GO:0030599|GO:0042545
Gso2g0714 336 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0714 Gso-Chr2 7460426 7463316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0714 54 331 Carbohydrate Esterase AT1G05310 38.796 1.99e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0714 - - gmx:100812950 501.901