Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0706 ATGGCTCCCTGTGCGGCTGCGGCGGAGTTTCCGGTGGGTCTCCGGGTTCTTGTGGTCGACGACGACGCCACCACGTTGAAGATTATCGAGCAAATGTCCATTCGCTGCCGTTACCGCGTTACCACATGCACTGAGGCTACTGTGGCTTTGAATCTTCTGCGGGAAAGGAAAGGTTGTTTTGATGTGGTGCTGAGTGATGTTCATATGCCAGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTGGAAATGGACCTTCCCGTAATTATGATGTCTGGTGATAGTACTACAAGTGCTGTCATGAAGGGAATCAGGCATGGGGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAACTAAGGAATATATGGCAGCATGTTGTTCGGAAATTCTGGAATGACAATAAAGAACTGGATAATTCTGGCAGCATGGAGGACAGTGATCGAAATAAATGGGGGAATGATGACGCTGAATATACTTCTTCTGTTGCTGATGCAGCAGAAGTAGTTAAAGCACCAAAAAAGAGGAGCAGTTTAAAAGAAGAAGATATTGAATTGGAGAGTGATGATCCAGCTACATCTAAGAAGCCCCGTGTAGTGTGGTCAGTAGAACTGCATCAACAATTTGTCAGTGCTGTGAATCAACTTGGGCTTGACAAGGCTGTGCCAAAGAGAATACTTGAATTGATGAATGTCCCTGGTTTGACAAGAGAAAATGTTGCAAGTCATTTGCAGAAATTTAGACTTTACTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAATGGGATGCTAAATGCAATTCCAGGGACTATAGAATCCAAGCTGGGTGCTACTGGAAGATTTGACATACAAGCTTTGGCTGCTGCTGGCCATGTTCCCCCTGAAACACTTGCAGCCCTTCATGCTGAGCTCTTAGGTCACCCGGCAACTCACATGATGTCTACAGTGGACCAGACTACCCTACTGCAAGCATCGATACAGGGGCTAAAACATTCCCATGCTGAACATGCTGTGGCGTATGGTCAGCCTCTTGTAAAGTGTCATTCCAACATTGGCAAGAATTTCTCTCCATCTATCTTAACTGTAAATGATACGTCATCAGGATATGGTACATGGCCATCATCTAATAATACAATTGGTTTAGTGAGACCCAATAGTAGTGTTGAAAGGGTGGGTATTCAGAATAACAACATGCTGATGGATATATTAGAGCACCAACAAAGCCAGCAGCACCAGCAAAAGCAACAGCTGCAGCAGCAGTCACTGATACATGATCAAAGTTGTTCAATCAATGTTCAACCATCTTGCATGGTGGTTCCCTCTCAATCCTCTGACACTTTCCAGGCAGTAAATAGTCCTGCTTCTGTCAACCAGGATTTCAGTTTTGCCAGGAATGCCATTATTGATTATAGTCTATTGTCACAAAAATCAAAGAATTCATTTAGTGCATCTCAATTTCCTGGTGGGGACACAAAAGCTCGAGGTGTTCTCTATGGGTATTCTACACCCTCCACTTGTTCAACAAGCTCCAGCAATGGCAATAGACAACAGCTTCAAAACTCCACTTTAACATTTGGTGCTGCAAGACCTTTGCCTAGTCTTTTGCCCATGTCTGACAGAAAAGATCCCTATGGTTTTAAATCAGGTTCAAATATTTGTTGA 1671 0.4393 MAPCAAAAEFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAEVVKAPKKRSSLKEEDIELESDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNGMLNAIPGTIESKLGATGRFDIQALAAAGHVPPETLAALHAELLGHPATHMMSTVDQTTLLQASIQGLKHSHAEHAVAYGQPLVKCHSNIGKNFSPSILTVNDTSSGYGTWPSSNNTIGLVRPNSSVERVGIQNNNMLMDILEHQQSQQHQQKQQLQQQSLIHDQSCSINVQPSCMVVPSQSSDTFQAVNSPASVNQDFSFARNAIIDYSLLSQKSKNSFSASQFPGGDTKARGVLYGYSTPSTCSTSSSNGNRQQLQNSTLTFGAARPLPSLLPMSDRKDPYGFKSGSNIC* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0706 556 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 11 455 - -
Gso2g0706 556 Coils Coil 403 423 - -
Gso2g0706 556 SUPERFAMILY Homeodomain-like 195 255 IPR009057 -
Gso2g0706 556 Pfam Response regulator receiver domain 16 125 IPR001789 GO:0000160
Gso2g0706 556 Gene3D - 194 257 - -
Gso2g0706 556 SMART REC_2 14 126 IPR001789 GO:0000160
Gso2g0706 556 CDD REC_typeB_ARR-like 16 130 - -
Gso2g0706 556 PIRSF RR_ARR_type-B 3 542 IPR017053 GO:0003677|GO:0003700|GO:0009736
Gso2g0706 556 Gene3D - 14 148 - -
Gso2g0706 556 Pfam Myb-like DNA-binding domain 200 248 IPR001005 -
Gso2g0706 556 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 455 IPR045279 GO:0009736
Gso2g0706 556 MobiDBLite consensus disorder prediction 172 194 - -
Gso2g0706 556 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Gso2g0706 556 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Gso2g0706 556 SUPERFAMILY CheY-like 13 135 IPR011006 -
Gso2g0706 556 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0706 Gso-Chr2 7392770 7397725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0706 48 312 Response Regulator Gene Family AT3G16857 54.355 2.70e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gso2g0706 Response_reg 1.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0706 - K14491 gmx:100817125 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1453 7 31718499 31724900 Gso2g0706 2 7392770 7397725 GST