Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0680 ATGAACCAGAAGTTCATCGGAAAGCCGCCGGCGACGGTGGACCTGGATCGGATGCCGGAGCGTGGGTCCCACCACCGGCGTTCCCACTCCGACACCTCCTTCCGCTTCGCCGCGAACTTCGACGACCTTCTCCTCTTCGACCCCTCCGACTTCGACATCTCCGGCCTCCCGTCGCCGCTCCCTCTGCCATCTCCGGTCTCCGCCGGCGTGGTTCCGATGTCCGTCGACTCCGACGAGTCCGGCAAACAGCCGAGGCCGGCCGGGGCGTCCGCCGGCGGGCACCTGCGGAGTCTGTCGGTGGATTCTGACTTCTTCGACGGGCTCGGGTTCGGCGGCGACGAGAGAGGCGCCGGGAAAGGAGGCGGCGGCGAGCGGAGGGTGGGGCACCACCGGCACAGCAACTCGATGGACGGGTCGTCGACGACGTCGTTTGAGGCGGACTCGGCGATGATAATGGACGGTGTGAAGAAAGCTATGGCTCCTGATAAACTTGCTGAACTTGCTCTTATGGATCCCAAGAGAGCTAAGAGGATTCTTGCTAACAGGCAATCTGCTGCAAGATCCAAGGAGAGGAAGATTCGTTACACAAGTGAGTTGGAGAGGAAGGTGCAGACTCTTCAGACTGAAGCAACTAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACTACAGATTTGACTACAGAGAATAAGGAGCTCAAACTGCGTTTAGAGGCTTTGGAGCAGGAAGCACAGCTTAGAGAAGATCTCAATGAGGCATTGAAGGAAGAACTGCAGCGCCTTAGGGCACAAAGTACTCGTTTGGGTGCTATTGGTGGTAACCCTTCTTTTGGTGGGATATTCAACCAGTTGGCTTCCCAATTAGCCATGCAACAGTTGTCTAATTCTGCACCCCATCAGCAGACACAACACCAGCCACAGGTTGGCATGCCTCCTCCTCCCTCTGGACAGAACCACCCTAACTTCATGGACTTCAATCAGCAGAAGTAA 993 0.568 MNQKFIGKPPATVDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDPSDFDISGLPSPLPLPSPVSAGVVPMSVDSDESGKQPRPAGASAGGHLRSLSVDSDFFDGLGFGGDERGAGKGGGGERRVGHHRHSNSMDGSSTTSFEADSAMIMDGVKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTTENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSTRLGAIGGNPSFGGIFNQLASQLAMQQLSNSAPHQQTQHQPQVGMPPPPSGQNHPNFMDFNQQK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0680 330 MobiDBLite consensus disorder prediction 118 133 - -
Gso2g0680 330 Gene3D - 172 224 - -
Gso2g0680 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 171 234 IPR004827 GO:0003700|GO:0006355
Gso2g0680 330 MobiDBLite consensus disorder prediction 14 32 - -
Gso2g0680 330 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 328 - -
Gso2g0680 330 MobiDBLite consensus disorder prediction 292 307 - -
Gso2g0680 330 MobiDBLite consensus disorder prediction 67 95 - -
Gso2g0680 330 MobiDBLite consensus disorder prediction 111 142 - -
Gso2g0680 330 SMART brlzneu 169 233 IPR004827 GO:0003700|GO:0006355
Gso2g0680 330 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 328 - -
Gso2g0680 330 Pfam bZIP transcription factor 173 231 IPR004827 GO:0003700|GO:0006355
Gso2g0680 330 MobiDBLite consensus disorder prediction 1 32 - -
Gso2g0680 330 MobiDBLite consensus disorder prediction 292 330 - -
Gso2g0680 330 Coils Coil 196 272 - -
Gso2g0680 330 CDD bZIP_plant_RF2 174 223 IPR044759 GO:0003700|GO:0006355
Gso2g0680 330 SUPERFAMILY Leucine zipper domain 173 225 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0680 Gso-Chr2 7127798 7133270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0680 9 329 bZIP Transcription Factor Family AT1G43700 48.703 4.49e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g0680 bZIP_1 3.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0680 K20557 - gmx:778142 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1353 16 33044812 33049283 Gso2g0680 2 7127798 7133270 GST