Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0678 ATGGATGCACAAGCCAAGAAAAAAGCATTGTTTCGTGCTAAATTGAATGCCCAAAAGAAGAAAAAGCGCATAGAATCTCCCCTTGTAAGGTATAATGAATTTGATCTACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAATCTGAAAGCTAATGCAGCTGGATTAACTCAGCATAACATTGCAAAGCCTGTTGCTGATACTAGCTTTTCCAAGGCTAAACCTGAACATTCTTTGGACTCACAATCCAAAGCGCCAGAAGCTTCACAAGTAGTTTCTAAACCTCAATCATCATCAGTGCTTCCACCAGGATTTTTTGATGACAGTAATTCAGGAAAAACAAGATCTGAACATTTAGTGGACTCTGATTTAGGTAGAAAAGCTGGGGTTTCTGCTCAAAGTCAGGTGTTAAACTTGGAGAAGGAGAAAGGTCATTTTCATGACAATAATGCTGCAAAGTCAAATGTTGGTCAAGCCGCAATGGAGAGTAGACAGACACCAGTCAAGTCTACTGATACAGAGATCCAGCAAATAAAAGGGACTCTGCCTGAAGGATTTTTTGACAATAAGGAGGCTGATTTGCGTGCTCGTGGCATAAAGCTTGTGAAGCCAGATGTCAAAGATGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCGGGAGGTGGACGACCGGTTGGAAGAAGAAGAGATTGATGCGGCCGAAATGATAGAAGAGGAGGAAGTTGTAGAGCAAAAGATACTTAGCGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGAGCTAAAAGCTGCTAATGCTGCAAAGCGTAGTAAATCATCTGAGATTGTAGCCAAGGAGTCTAGACGAGAAGAGCCATCCAGTGATGATGAAAGTGAAGGGAATTTGGCCGTGGACTGGAGAGCACAACACTTGTGA 981 0.421 MDAQAKKKALFRAKLNAQKKKKRIESPLVRYNEFDLPVCRVCDVVLKSESLWDAHQVSRKHREAISNLKANAAGLTQHNIAKPVADTSFSKAKPEHSLDSQSKAPEASQVVSKPQSSSVLPPGFFDDSNSGKTRSEHLVDSDLGRKAGVSAQSQVLNLEKEKGHFHDNNAAKSNVGQAAMESRQTPVKSTDTEIQQIKGTLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLREVDDRLEEEEIDAAEMIEEEEVVEQKILSEKVEMLKKRRLELKAANAAKRSKSSEIVAKESRREEPSSDDESEGNLAVDWRAQHL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0678 326 Pfam Zinc-finger of C2H2 type 39 61 - -
Gso2g0678 326 MobiDBLite consensus disorder prediction 285 318 - -
Gso2g0678 326 MobiDBLite consensus disorder prediction 88 146 - -
Gso2g0678 326 MobiDBLite consensus disorder prediction 101 124 - -
Gso2g0678 326 SUPERFAMILY beta-beta-alpha zinc fingers 34 69 IPR036236 -
Gso2g0678 326 MobiDBLite consensus disorder prediction 170 190 - -
Gso2g0678 326 Gene3D Classic Zinc Finger 34 70 - -
Gso2g0678 326 MobiDBLite consensus disorder prediction 285 326 - -
Gso2g0678 326 MobiDBLite consensus disorder prediction 160 190 - -
Gso2g0678 326 Coils Coil 233 267 - -
Gso2g0678 326 PANTHER UNCHARACTERIZED 1 326 IPR040050 GO:0003676|GO:0005681|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0678 Gso-Chr2 7101135 7106943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0678 1 326 C2H2 Transcription Factor Family AT3G02860 51.176 1.35e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0678 K13104 - gmx:100802710 571.622