Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0677 ATGTCATCAAATCAAGCATCCCTTAACCTTAACCAAGCCAAATTTGTCCTTCCAACCAATAATGACCTTGAGCAACAGCAACAACAACAACAACAAGCAACAACAACTCTAGAGATTGAAGCTGATCATGAGGACATCTTTGACTACTCAAAAAGATCTCAATGGCTCCGCGCTGCGGTTTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCAATCATGATGGGTGTTGGAGCAGTGAAGCATGACATCAAGGCCATGATCTTATCAGGGTTTGCAGGGTTGGTGGCAGGAGCATGTAGCATGGCCATAGGTGAGTTTGTGTCAGTTTACTCACAACTAGACATTGAGGTTGCTCAAAGGAAGAGAGAAAAGGAAAGGGGACAAAGTAGAGGGAGAGATATTCAAGAGGAAGACACCAATTATGAAGAGAAAGATAGTTTGCCAAACCCTTTGCAAGCAGCAGCAGCATCAGCTTTGGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCATCATTTATAAGGGAATATAAGGTGAGGCTTGGAGTGATTGTTGCTGCTGTGACTTTTGCTTTGGTGGTGTTTGGTTGGTTAGGGGCTCTGTGGGGTAAGGCTCCAGTATTGAGGTCTGCTTTGAGGGTCTTGTTTGGGGGTTGGATGGCCATGGCTATCACTTTTGGGCTAACCAAGTTGATTGGATCAAGTGCACTTTAG 720 0.4542 MSSNQASLNLNQAKFVLPTNNDLEQQQQQQQQATTTLEIEADHEDIFDYSKRSQWLRAAVLGANDGLVSTASIMMGVGAVKHDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKREKERGQSRGRDIQEEDTNYEEKDSLPNPLQAAAASALAFSVGAMVPLLAASFIREYKVRLGVIVAAVTFALVVFGWLGALWGKAPVLRSALRVLFGGWMAMAITFGLTKLIGSSAL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0677 239 CDD Nodulin-21 54 208 - -
Gso2g0677 239 Pfam VIT family 142 231 IPR008217 GO:0005384|GO:0030026
Gso2g0677 239 Pfam VIT family 56 131 IPR008217 GO:0005384|GO:0030026
Gso2g0677 239 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 236 IPR008217 GO:0005384|GO:0030026
Gso2g0677 239 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 21 236 - -
Gso2g0677 239 Coils Coil 20 40 - -
Gso2g0677 239 Coils Coil 232 239 - -
Gso2g0677 239 MobiDBLite consensus disorder prediction 122 147 - -
Gso2g0677 239 MobiDBLite consensus disorder prediction 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0677 Gso-Chr2 7088798 7090044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0677 37 239 Nodulin-like Gene Family AT3G43660 68.966 6.30e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0677 K22736 - gmx:100802179 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1351 16 33020204 33021268 Gso2g0677 2 7088798 7090044 GST
Gso2g0677 2 7088798 7090044 Gso20g1335 20 43448404 43449442 PCT
Gso2g0677 2 7088798 7090044 Gso10g2020 10 47186962 47187928 PCT
Gso20g1335 20 43448404 43449442 Gso2g0677 2 7088798 7090044 PCT
Gso10g2020 10 47186962 47187928 Gso2g0677 2 7088798 7090044 PCT