Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0674 ATGTTGGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAGGCTCTGGTGATGCAGTGGCAGCACCACCGGTTGTTGGTGGTGGTGCTGCTGCATCAGGAGGAGCACATGAAGGAGGTGCCAACGGCGGCGGCGGATCAAATTCAGGGGATGATAGAGTTGAGGAAGGTGACAAGAGCTTTGGTGGGAACAGGTGGCCAAGACAAGAGACTTTGGCTTTGTTGAAGATACGGTCGGATATGGACGTGGCTTTTAGAGACGCAAGTGTAAAGGGTCCCTTGTGGGAAGAGGTTTCTAGGAAACTGGCAGAGCTTGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAGTTTGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAAGGTCGAAGTGGGAAATCAGAAGGCAAAACTTATCGCTTCTTTGATCAATTACAAGCCCTTGAAAACAACCCTTCAATCCATGCTATGCAATCCCCAACACCAACACCTTCAAAGCCACCACAAACAACAGCACTACTTGCAACACCAGTGTCAATAGTGGTAACAACAACTACTACACCATCAACATTAGTGTCTAATAATGCCACTGTTCCATCCACAAATACACCCCCTTTGCCTCAAGCCATTCTCAACATAACACCACCATCAACACTAAACATCACAACCCCTTCTTTTCCATCATCAAACCCTACAACATACTTCCCAACACAAACACCAAACCCTACAACCAACAACAACCCTCCAAACACCATCACCCCAGCTTCCTTCCCCAACTTCTCCGCAGATCTCTTGTCGAATTCGAGTTTTTCATCGACTTCGTCGGAGGAAACAACGACGATGGGGGGAGGGGGAATGAGGCGCAAGAGGAAGAGGAAGTGGAAGGACTTCTTTGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGGGCTGCAAAGGAGGTTCTTGGAGGCCATTGAGAAAAGAGAACAAGAGCGTGTGGTGAGAGAGGAAGCGTGGAGAATGCAAGAGATGCAAAGGATCAACAGGGAAAGGGAGATTCTAGCACAGGAGAGGTCCATTGCTGCAGCAAAAGATGCTGCTGTTATGACATTTTTGCAAAAGATAGCCGAACATCAGCAACAAGAAATCAATCTTGAGCCAGCATTGAATAACAACAACAACAGCATCACTGTCGTTCCACAGCAACCAGTGCCACAAACAACTACAACACCAACACCAACACCACAACAAGCACAAACAACAATAGTTCCTGAGGCCCCACAACCACAACAACAAATAGTGGTGAGTAATGTTGAAAACAATAAAGCTGACAATAACGGTGAGAATTTGACGATGGGAGCGAGCTCTTCAAGGTGGCCAAAAATGGAGGTACAGGCACTGATAAACCTAAGAACAAGCCTGGAAACAAAGTACCAGGAAAATGGACCAAAAGGGCCACTGTGGGAGGAGATCTCAGCGTTGATGAGGAAAATGGGGTACAACCGGAATGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAAAGCAGCAAGAAGAGGCCAGAAGATTCCAAGACTTGTCCCTATTTTCACCAGTTGGAGGCTCTATACAGGGAGAAGAACAAGAGAGAGGGGCAGATGAAGCCGGATAGCATGATGGCGCCGCTCATGGTGCAGCCTGAGCAACAATGGCCTCCTCAAACGCACGTGGTGCCGCCAGAAGTGACCATGGGAGACGCCCAGAATGACCCCATGGACCGGCGGCACGAGGAAGTTGAGGAGGACGAAGCCGACAAGGAAATTGGAGATGAAGACGAGGACGAGGACGACGAAGGAAGTGATAATTATGAGATAGTAGCTAGCAAACCAGCTTCTGGAGAGTGA 1896 0.4842 MLGDSAVLGTGGGGSGDAVAAPPVVGGGAAASGGAHEGGANGGGGSNSGDDRVEEGDKSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALENNPSIHAMQSPTPTPSKPPQTTALLATPVSIVVTTTTTPSTLVSNNATVPSTNTPPLPQAILNITPPSTLNITTPSFPSSNPTTYFPTQTPNPTTNNNPPNTITPASFPNFSADLLSNSSFSSTSSEETTTMGGGGMRRKRKRKWKDFFERLMKEVIEKQEGLQRRFLEAIEKREQERVVREEAWRMQEMQRINREREILAQERSIAAAKDAAVMTFLQKIAEHQQQEINLEPALNNNNNSITVVPQQPVPQTTTTPTPTPQQAQTTIVPEAPQPQQQIVVSNVENNKADNNGENLTMGASSSRWPKMEVQALINLRTSLETKYQENGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESSKKRPEDSKTCPYFHQLEALYREKNKREGQMKPDSMMAPLMVQPEQQWPPQTHVVPPEVTMGDAQNDPMDRRHEEVEEDEADKEIGDEDEDEDDEGSDNYEIVASKPASGE* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0674 631 SMART sant 61 123 IPR001005 -
Gso2g0674 631 SMART sant 451 513 IPR001005 -
Gso2g0674 631 Gene3D - 455 516 - -
Gso2g0674 631 Gene3D - 65 126 - -
Gso2g0674 631 MobiDBLite consensus disorder prediction 585 599 - -
Gso2g0674 631 ProSiteProfiles Myb-like domain profile. 57 121 IPR001005 -
Gso2g0674 631 MobiDBLite consensus disorder prediction 600 618 - -
Gso2g0674 631 MobiDBLite consensus disorder prediction 268 282 - -
Gso2g0674 631 MobiDBLite consensus disorder prediction 1 64 - -
Gso2g0674 631 Pfam Myb/SANT-like DNA-binding domain 63 149 IPR044822 -
Gso2g0674 631 Pfam Myb/SANT-like DNA-binding domain 453 540 IPR044822 -
Gso2g0674 631 MobiDBLite consensus disorder prediction 268 289 - -
Gso2g0674 631 CDD GT1 453 518 - -
Gso2g0674 631 ProSiteProfiles Myb-like domain profile. 447 511 IPR001005 -
Gso2g0674 631 CDD GT1 63 128 - -
Gso2g0674 631 PANTHER - 1 624 - -
Gso2g0674 631 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 624 - -
Gso2g0674 631 MobiDBLite consensus disorder prediction 569 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0674 Gso-Chr2 7029067 7033855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0674 54 568 Trihelix Transcription Factor Family AT1G76880 55.866 7.29e-170 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso2g0674 Myb_DNA-bind_4 1.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0674 - - gmx:547624 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1344 16 32944201 32948003 Gso2g0674 2 7029067 7033855 GST
Gso2g0674 2 7029067 7033855 Gso20g1341 20 43513840 43517239 PCT
Gso2g0674 2 7029067 7033855 Gso10g2014 10 47123702 47127225 PCT
Gso20g1341 20 43513840 43517239 Gso2g0674 2 7029067 7033855 PCT
Gso10g2014 10 47123702 47127225 Gso2g0674 2 7029067 7033855 PCT