Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0673 ATGCAGCTAGGAGACTCAAGTGTGTTGGAGATCTCCTCCCATACCGAGCCCGAGATGGCGGTGGTGTCGCCACCAGAAGAAGCACCACATGAAGGCGGCCACAACAGTGGTGGTGGTGGTGGTAGTGATGAGATGATTGGGATGGATTTGGATGCAAATTCAGGTGAAGGAAATGAAGGTAACAAGATGAGCTTTGGAGGGAACCGGTGGCCCCGTCAAGAAACTTTGGCTCTCTTGAAGATAAGGTTGGATATGGATGCAGTTTTTCGAGATTCAAGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAATTGGCAGAGCTTGGATATCAAAGGAGTGCAAAGAAGTGCAAGGAAAAATTTGAGAACGTGTACAAGTACAACAAGAGAACCAAAGAGAACAAAAGTGGCAAATCACATGGAAAAGCCTATAAATTCTTTGATCAATTACAAGCCCTCGAGAACCAATTCACAGTCTCTTACCCGCCAAAACCACAACCTACTTCTACTTTGACTACAACAAACACATTGACAAGTGATCATGGTAACAAAGTTATCTCTTATGTCACACCTTTTCCTTCAACAAACCCTACTCTCATTCCACCTTCTCCACAAACCAACACCAACACCACTACCACCACAACAACAACATCCACTACCGACCCTAGAGACTCATCACCACCACAAACCAACAACAACAACAATAGTGTCCCACATTCTTTGCCAAACATGAACGCTCCTTTCTTAACCACCACCACCTCCACCTCTTCCTCCACAGCATCAGATGAAGACTTGGAAGAGAGGTATAGGAGGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACTAGGAAGGTCTTGTCGAAGCAAGAGGAGATGCAAAAGAAGTTCTTGGAAGCCATGGACCAAAGGGAGAGGGAAAGGGTGGCACAACAAGACAATTGGAGGATGCAAGAAATGGCAAGGATCAATAGGGAACATGAGATTCTTGTTCAAGAGAGATCAACAGCATCAGCCAAAGATGCTGCAGTCATTGCATTATTGCAAAAGATGTACGGCCAGCAAAACCCCACACAACATGTTGAAGTAGAGCCACCACAGCAACAGAAGCAAACAATGCCACAATCACAGCCTCCAATATTAATGCCAAACAATAATTTTGAGGTCAAGAAAATGAATAATGGTCACAGTGCTACAAGTACTACTACTACTACTACTTCTCCGGTGAGTTCTTCTTCTTCTTCTCGGTGGCCAAAGGCCGAAGTTCATGATTTGATAAGGTTAAGGACAAGTCTTGAAATCAAGTATCAAGAGAATGGACCAAAGGCTCCATTGTGGGAAGATATATCAATTGCAATGCAAAGGCTTGGGTACAACCGGAGTGCAAAGAGATGCAAGGAAAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTTAGGGAGAGTAGCAAAGAAAGGCGTGAAGATAGCAAGACATGTCCCTATTTCCACGAGCTTGAAGCTCTATACAAAGAAAAGGGAAAATCTCAGAACCCCTTTGGCATGTTTCAGAATATGACGCCAAATGAGACGATGATGATGGAGCCATTGATGGTGCAACCGGAGCAACAATGGAGGCCTCCACCTCAATCATTGGAAGAGGGTATAGGGAAGGATAATGCAAGTGAAGAATATAATCAAGAAAAAGAAGAAGAAGTAGAAGAAAATGGTGGTGATGATGATAATATTGAAGAAGATGGAGATAGTGTGGAAGATGCAGGACCAAACCCGTGTGAGATTGCGACAAATAATTAA 1797 0.4363 MQLGDSSVLEISSHTEPEMAVVSPPEEAPHEGGHNSGGGGGSDEMIGMDLDANSGEGNEGNKMSFGGNRWPRQETLALLKIRLDMDAVFRDSSLKGPLWEEVSRKLAELGYQRSAKKCKEKFENVYKYNKRTKENKSGKSHGKAYKFFDQLQALENQFTVSYPPKPQPTSTLTTTNTLTSDHGNKVISYVTPFPSTNPTLIPPSPQTNTNTTTTTTTTSTTDPRDSSPPQTNNNNNSVPHSLPNMNAPFLTTTTSTSSSTASDEDLEERYRRKRKWKDYFRRLTRKVLSKQEEMQKKFLEAMDQRERERVAQQDNWRMQEMARINREHEILVQERSTASAKDAAVIALLQKMYGQQNPTQHVEVEPPQQQKQTMPQSQPPILMPNNNFEVKKMNNGHSATSTTTTTTSPVSSSSSSRWPKAEVHDLIRLRTSLEIKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRESSKERREDSKTCPYFHELEALYKEKGKSQNPFGMFQNMTPNETMMMEPLMVQPEQQWRPPPQSLEEGIGKDNASEEYNQEKEEEVEENGGDDDNIEEDGDSVEDAGPNPCEIATNN* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0673 598 CDD GT1 68 133 - -
Gso2g0673 598 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 1 594 - -
Gso2g0673 598 PANTHER - 1 594 - -
Gso2g0673 598 MobiDBLite consensus disorder prediction 560 586 - -
Gso2g0673 598 CDD GT1 417 481 - -
Gso2g0673 598 Gene3D - 70 131 - -
Gso2g0673 598 Gene3D - 418 479 - -
Gso2g0673 598 MobiDBLite consensus disorder prediction 1 68 - -
Gso2g0673 598 Pfam Myb/SANT-like DNA-binding domain 416 503 IPR044822 -
Gso2g0673 598 Pfam Myb/SANT-like DNA-binding domain 68 154 IPR044822 -
Gso2g0673 598 ProSiteProfiles Myb-like domain profile. 410 474 IPR001005 -
Gso2g0673 598 MobiDBLite consensus disorder prediction 160 195 - -
Gso2g0673 598 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
Gso2g0673 598 MobiDBLite consensus disorder prediction 202 261 - -
Gso2g0673 598 MobiDBLite consensus disorder prediction 160 269 - -
Gso2g0673 598 SMART sant 66 128 IPR001005 -
Gso2g0673 598 SMART sant 414 476 IPR001005 -
Gso2g0673 598 MobiDBLite consensus disorder prediction 391 419 - -
Gso2g0673 598 MobiDBLite consensus disorder prediction 535 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0673 Gso-Chr2 7013579 7016575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0673 65 539 Trihelix Transcription Factor Family AT1G76880 49.902 1.13e-137 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso2g0673 Myb_DNA-bind_4 7.7e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0673 - - gmx:100807507 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1343 16 32920226 32923238 Gso2g0673 2 7013579 7016575 GST
Gso2g0673 2 7013579 7016575 Gso20g1342 20 43540974 43544457 PCT
Gso2g0673 2 7013579 7016575 Gso10g2013 10 47106177 47109721 PCT
Gso20g1342 20 43540974 43544457 Gso2g0673 2 7013579 7016575 PCT
Gso10g2013 10 47106177 47109721 Gso2g0673 2 7013579 7016575 PCT