Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso2g0640 | ATGAGAAGAAGACTACGAGAGCTTCTTAGCCTCTGTTTTTCTCTAAAGCACAAACCTTTAGCAAAATCAGCACCACCACCCACTTCTTTCTTACAAAGTAGCATCACATTCTCAACCTCTTCCTCCTCCGCAACCCCTCCCATCGAAGAACCAAAGACTTCAACTTCGTCATCCAAGTCCCAAAGGGACTCGCTAATTTTCGAACAGTTCAAGCAAAGAAAACTCAAAGGGTCTCCAAAAGACTCAAAGGGTACCCCTCAAGTGTGTTCAACTTCAGTGCCACTAAGTTCTGATGCTGACACTGAAAAGGTGGTTCAAAAGGGTGTGCGGAATGAGAATGACCCCACCTTGGTGGTTAGAGGCTTCAAGGAGTTGGGGGTGAGTGAGGAGCTTGTTGAGGTGATGGAAGGGATTGGTGAGTTTGTTCCTACTGAGATACAGTGTGTGGCTATTCCTGCTGTTTTGGAAGGGAAGAGTGTGCTGTTGAGTTCACCATCTGAACCTGACAGAACCTTGGCCTTCTTGTTGCCACTTATTCAGCTGCTAAGACGGGATGGAGGGTTGCTTGGTTCGAATTCAAAGTATCCACAAGCCATCGTGCTTTGTGCTACAGAGGAGAAAAGTGAGCAGTGCTTTAATGCTGCAAAATATATCATCCATAATGCAGAATTGAAGTCTGCAAAGGATAGTGCTTCACCAGATAACGGGCAGTCAAAGGCCTCAATTGGCCTCATGATTGGGACTCCTAGTGAGATTCTTGAATACATTGAAGAGGGGAGTGTTGTTCCTGCTGAAATAAGATACTTGGTGTTGGATGAGGCCGATTGCATGCTTGGTAGTGGCCTTGGTCCTGAGATCCATAAAATTCTGAGACCATTACAAGATCAAGAATCAAAATCTTGTGTTAAAAGATTACAAACTATTTTGGCAATTTCAACAATAGCTGAGGTTTTGGGTGAACAATCCTCCGTTGTAAAGCATCTTGAGTGCGATCATGCAGGAAATATTTCTGCAATGTCTCTAGAAATGGAACAAACAGAAGTATTTCATTTCACAGAGTCTCTTGACGCTCTTAGGAAAAAAGTGGCAGAGGCCATGGATTCCCTTTTGAAACAACAGTGA | 1122 | 0.4394 | MRRRLRELLSLCFSLKHKPLAKSAPPPTSFLQSSITFSTSSSSATPPIEEPKTSTSSSKSQRDSLIFEQFKQRKLKGSPKDSKGTPQVCSTSVPLSSDADTEKVVQKGVRNENDPTLVVRGFKELGVSEELVEVMEGIGEFVPTEIQCVAIPAVLEGKSVLLSSPSEPDRTLAFLLPLIQLLRRDGGLLGSNSKYPQAIVLCATEEKSEQCFNAAKYIIHNAELKSAKDSASPDNGQSKASIGLMIGTPSEILEYIEEGSVVPAEIRYLVLDEADCMLGSGLGPEIHKILRPLQDQESKSCVKRLQTILAISTIAEVLGEQSSVVKHLECDHAGNISAMSLEMEQTEVFHFTESLDALRKKVAEAMDSLLKQQ* | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso2g0640 | 373 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 151 | 332 | IPR014001 | - | |
Gso2g0640 | 373 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | 1 | 373 | - | - | |
Gso2g0640 | 373 | SMART | poly_2 | 310 | 372 | IPR002004 | GO:0003723 | |
Gso2g0640 | 373 | MobiDBLite | consensus disorder prediction | 19 | 108 | - | - | |
Gso2g0640 | 373 | MobiDBLite | consensus disorder prediction | 83 | 99 | - | - | |
Gso2g0640 | 373 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 112 | 310 | IPR027417 | - | |
Gso2g0640 | 373 | Pfam | Poly-adenylate binding protein, unique domain | 325 | 367 | IPR002004 | GO:0003723 | |
Gso2g0640 | 373 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE | 1 | 373 | - | - | |
Gso2g0640 | 373 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 120 | 148 | IPR014014 | GO:0003724 | |
Gso2g0640 | 373 | MobiDBLite | consensus disorder prediction | 26 | 65 | - | - | |
Gso2g0640 | 373 | Pfam | DEAD/DEAH box helicase | 144 | 309 | IPR011545 | GO:0003676|GO:0005524 | |
Gso2g0640 | 373 | Gene3D | - | 94 | 325 | IPR027417 | - | |
Gso2g0640 | 373 | SUPERFAMILY | PABC (PABP) domain | 316 | 369 | IPR036053 | GO:0003723 | |
Gso2g0640 | 373 | SMART | ultradead3 | 139 | 322 | IPR014001 | - | |
Gso2g0640 | 373 | ProSiteProfiles | Poly(A)-binding protein C-terminal (PABC) domain profile. | 258 | 373 | IPR002004 | GO:0003723 | |
Gso2g0640 | 373 | MobiDBLite | consensus disorder prediction | 66 | 80 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso2g0640 | Gso-Chr2 | 6632072 | 6635295 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso2g0640 | 119 | 293 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 24.725 | 1.89e-10 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso2g0640 | - | - | gmx:100800575 | 673.315 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso16g1288 | 16 | 32258848 | 32261535 | Gso2g0640 | 2 | 6632072 | 6635295 | GST |