Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0636 ATGGATTTCGGTGAAGGTTACGTATCAAATGAGCATCGCGAGCTTCATCGATCTGCAACAGAAAGTGCAGATCCATTATCTGTTTCTCCATTGCAGCTTTCACCTAAGTCATCACGATCTCAAAAATCTCCAAGGTCCCCTAAAACTCCTAGGTCTCCACAATCTCCAAGGTCCCCAAAGGTGCAGGGCAAGTGCAGCAATCTAAGTCCAAGGAGTCATAGACAATCATATTTCCAAAAAGATGGACGTCCAAAGAAAGGTGGTTCTGGGGGAAAAGGCACCTGGGGTGGATTGCTTGATACAGATGACACAAATGTTCTTGATCCTAATGATCCAAACTATGACAGCAGTGAGGAATTAGACCATTCAAATGAAAAGAAACCGATGACAGATCTTGACAACTACAAGAAAAAAGCTACAATAATAGTGGAGGAATATTTTGCCACTGATGATGTTGTTGCAACAATGAATGAAGTTAAAGAATTGGGAAAACCACAGTATGGCTACTATTTTGTCAAAAAACTTGTCTCTATGTCCATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTATTCTGTTATCTGCACTTTATGCCGACGTACTTGATCCTTCACAAGTTTACAAAGGCTTCAGCAAATTAGTTGACTCAGCAGATGACTTGATTGTAGATATACCAGACACAGTTGAAGTTCTAGCTCTTTTCATAGCTCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAGCACATGGCCTACTTACCCAAAGATTCAAAAGGGGTTGAGGTCTTGAAAAAAACTGAGAAAAGCTATCTAGCTGCCCCTCTGCATGCGGAAATCATAGAGCGATGCTGGGGTGGAAGTAAGAATACCACAGTTGATGATGTTAAAGCCAAGATAAACAATTTTTTGAAGGAGTATGTTGGAAGTGGTGACAAGAAAGAAGCCTTCAGATGCATCAAAGATTTGAAAGTTCCTTTTTTCCATCACGAAATAGTGAAGCGGGCACTTATAATGGCAATGGAGAGACGTCAAGCAGAATCCCCACTGTTAGACCTGTTGAGGGCAGCAGCTGAAGAAGGTTTCATTAACTCCAGCCAAATGTCTAAAGGTTTCGGTCGGTTGATTGACACTGTTGACGACTTATCACTTGACATACCAGATGCACGTGGAATACTACAGAAACTGATGTCTAAAGCAGCATCTGAGGGTTGGTTATGTGTGTCATCTTTGAAATCACTTTCAGTGGAGCCTGAAAAGAACACCATAGAAGATAGTGCTGCCAAAAGTTTCAAGGTAAAGACTCAGTCTATCATTCAAGAGTACTTCTTATCGGGTGATATATTGGAGGTAAATAGCTGTCTAGAACAAGAAAACAGCAAGAACTGTGCTGCACTCAATGCAATCTTTGTTAAAAAACTGATAACTCTGGCAATGGATAGGAAGAATAGAGAGAAGGAAATGGCTTCTGTGTTGCTGTCGTCTTTGTGCTTCCCAGCCGATGATGTAGTGAGTGGTTTTGTAATGTTGATAGAGTCAGCAGATGATACTGCTCTCGACAATCCTGTTGTTGTCGAGGATCTTGCTATGTTTCTAGCTAGAGCAGTGGTGGATGAAGTCCTAGCCCCACAACACCTTGAAGAGATTGGAGCACAGAGTTTGGGACCAGGTTCAATTGGGAGCAAAGTGCTTCAAATGACAAAGTCATTGCTAAAGGCAAGACTTGCCGGGGAGCGAATCTTAAGATGTTGGGGTGGTGGAGGGAGTAGCAGGCCTGGATGGGCATTTGAGGATGTCAAGGACATGATTGGGAAGCTGTTGGAGGAGTATGAGTCTGGAGGCGAGATAAGGGAGGCATGTCGCTGCATGAAAGAGTTAGGAATGCCATTTTTCCATCATGAGGTTGTTAAGAAGGCTTTGGTGACAACCATTGAAAAGAAGAATGAGAGGTTGTGGGGTTTACTCAAGGAGTGCTTTGAATCAGGACTAATAACCATGAATCAAATGGTGAAGGGTTTTGGAAGGGTTGCTGAATCTCTTGATGACTTGGCCTTGGATGTCCCTGATGCTAAAAATCAGTTTGCATGCTATTTTGAAAGAGCAAAGGCCAATGGATGGTTGGACAATTCATTTTGTTTCAGCAAACAGGAACATGCAACAGAGAATGGCACTCACTAA 2187 0.4243 MDFGEGYVSNEHRELHRSATESADPLSVSPLQLSPKSSRSQKSPRSPKTPRSPQSPRSPKVQGKCSNLSPRSHRQSYFQKDGRPKKGGSGGKGTWGGLLDTDDTNVLDPNDPNYDSSEELDHSNEKKPMTDLDNYKKKATIIVEEYFATDDVVATMNEVKELGKPQYGYYFVKKLVSMSMDRHDKEKEMAAILLSALYADVLDPSQVYKGFSKLVDSADDLIVDIPDTVEVLALFIARAVVDDILPPAFLKKHMAYLPKDSKGVEVLKKTEKSYLAAPLHAEIIERCWGGSKNTTVDDVKAKINNFLKEYVGSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMERRQAESPLLDLLRAAAEEGFINSSQMSKGFGRLIDTVDDLSLDIPDARGILQKLMSKAASEGWLCVSSLKSLSVEPEKNTIEDSAAKSFKVKTQSIIQEYFLSGDILEVNSCLEQENSKNCAALNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGAQSLGPGSIGSKVLQMTKSLLKARLAGERILRCWGGGGSSRPGWAFEDVKDMIGKLLEEYESGGEIREACRCMKELGMPFFHHEVVKKALVTTIEKKNERLWGLLKECFESGLITMNQMVKGFGRVAESLDDLALDVPDAKNQFACYFERAKANGWLDNSFCFSKQEHATENGTH* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0636 728 PANTHER PROGRAMMED CELL DEATH 4 1 721 IPR039778 GO:0045892
Gso2g0636 728 MobiDBLite consensus disorder prediction 1 131 - -
Gso2g0636 728 SUPERFAMILY ARM repeat 598 716 IPR016024 -
Gso2g0636 728 MobiDBLite consensus disorder prediction 1 20 - -
Gso2g0636 728 Gene3D - 422 577 - -
Gso2g0636 728 Gene3D - 121 272 - -
Gso2g0636 728 MobiDBLite consensus disorder prediction 55 75 - -
Gso2g0636 728 SMART ma3_7 299 410 IPR003891 -
Gso2g0636 728 SMART ma3_7 135 246 IPR003891 -
Gso2g0636 728 SMART ma3_7 602 711 IPR003891 -
Gso2g0636 728 SMART ma3_7 434 545 IPR003891 -
Gso2g0636 728 SUPERFAMILY ARM repeat 131 292 IPR016024 -
Gso2g0636 728 SUPERFAMILY ARM repeat 431 591 IPR016024 -
Gso2g0636 728 MobiDBLite consensus disorder prediction 115 131 - -
Gso2g0636 728 ProSiteProfiles MI domain profile. 134 255 IPR003891 -
Gso2g0636 728 MobiDBLite consensus disorder prediction 22 48 - -
Gso2g0636 728 ProSiteProfiles MI domain profile. 433 554 IPR003891 -
Gso2g0636 728 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 721 - -
Gso2g0636 728 Gene3D - 585 717 - -
Gso2g0636 728 Gene3D - 284 417 - -
Gso2g0636 728 ProSiteProfiles MI domain profile. 601 720 IPR003891 -
Gso2g0636 728 Pfam MA3 domain 603 711 IPR003891 -
Gso2g0636 728 Pfam MA3 domain 300 409 IPR003891 -
Gso2g0636 728 Pfam MA3 domain 435 544 IPR003891 -
Gso2g0636 728 Pfam MA3 domain 136 246 IPR003891 -
Gso2g0636 728 ProSiteProfiles MI domain profile. 298 419 IPR003891 -
Gso2g0636 728 SUPERFAMILY ARM repeat 295 415 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0636 Gso-Chr2 6599968 6604800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0636 609 698 Eukaryotic Initiation Factors Gene Family AT4G30680 33.333 8.17e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0636 - - gmx:102668745 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1284 16 32206840 32210085 Gso2g0636 2 6599968 6604800 GST