Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0634 ATGGCACACAGAACAGCACCATCTTGGTCTACCTTCACACTTAAATGGATTTATGATGTCTTCCTCAGTTTTAGAGGTGAAGACACTCGTCAAAAATTCACTGGCAATCTCTACAATTCTCTGTGTGAAAAGGGAGTTCATACTTTCATTGATGATGAAGGGCTTAGAAGAGGGGAAGAAATTACACCAGCTCTTCTCAATGCCATTCAAAATTCAAGGATTGCCATTGTTGTTTTCTCTAAGAACTATGCATCCTCAACTTTTTGTTTGGATAAACTTGTCAAGATCCTTGAGTGCTTGAAGGAAGAAAAAGGTCGATCAGTTTTTCCAATATTTTATGATGTGGATCCATCACATGTTCGGCATCAGAAAGGGACTTATTCAGAAGCATTGGCAAAACATGAAGAAAGGTTCCCAGATGACAGTGACAAAGTGCAAAAATGGAGGAAGGCTTTATATGAAGCAGCCAATCTATCAGGCTGGCATTTCCAACATGGGTATTCTATACTTCCTTTTTATTGTATGTGTTATAAACTGATCTCTTTTTACATTTTTTCAATTCACATGTTTTATACAATGGGCAGGGAGCTAGAATATAAGTCCATCCGAAAAATTGTTAAAGAGGTCTATAAAAGGATTAGTTGCATTCCTTTACACATTGCTGATAATCCAATTGGGCTAGAGCATGCAGTGCTAGAAGTGAAATCTCTCCTTGGACATGGTTCTGATGTCAACATTATAGGAATTTATGGTATTGGTGGTATCGGTAAAACCACAATTTCTCGTGCCGTGTATAACTTGATTTGTAGTCAATTTGAAGGCACATGTTTTCTCCTTGACATTAGAGAAAAGGCAATCAATAAGCAAGGTCTTGTCCAACTCCAAGAAATGTTACTTTCTGAAGTACTCAAGAAGAAACATATCAAAGTGGGTGATGTTAACAGAGGAATTCCAATAATAAAAAGGAGGCTTGAAAAAAAGAAGGTTCTTCTGGTTTTAGATGATGTTGACAAATTAGAGCAGTTAAAGGTTCTTGCAGGAGAAAGTCGTTGGTTTGGCAATGGAAGTATAATCATTATCACCACAAGAGACAAACACTTGCTAGCGACTCATGGGGTGGTAAAAATATATGATGTTAAACCATTAAATGTTGCAAAGGCTCTTGAATTGTTTAACTGGTGTGCCTTTAAAAATCATAAAGCTGATCCACTTTATGTGAATATTGCTAACCGTGCAGTTTCTTATGCGTGTGGCATTCCATTGGCTCTGGAAGTGATAGGTTCTCATTTATTTGGAAAAACGAAGAGCCTCTGGGCAATGGGGTACGAATGTAATTCTGCATTGGATAAATATGAAAGAATTCCTCATGAAAAGATCCATGAAATACTTAAAGTAAGCTATGATGGTTTGGAAGAAAATGAGAAGCAAATTTTCCTTGACATTGCTTGTTTCTTCAATACTTGTGGTGTGGGCTACGTCACATCAGTGCTACGTGCTCATGGTTTTCATGTAAAAGATGGTTTGAGAGTGTTGGTTGACAGATCTCTCTTAAAGATTGATGCTTCTGGTTGTGTGAGAATGCATGATCTAATTCGAGACACAGGCAGAGAAATTGTAAGGCAAGAATCAACAGTTGAGCCTGGCAGACGTAGTAGGTTATGGTTTGAAGAGGACATTGTTCATGTTTTGGAAGAAAATACGGGAACTGATAAAATAGAATTCATAAAGCTTGAAGGGTACAACAACATACAAGTGCAATGGAATGGAAAAGCCTTGAAGGAGATGAAGAACCTGAGGATTTTGATTATTGAAAATACAACCTTTTCTACAGGCCCCGAGCATCTGCCAAATAGTTTGAGAGTGCTAGATTGGAGTTGCTACCCTTCACCATCTTTGCCTGCTGATTTCAATCCTAAACGAGTTGAGCTACTCCTTATGCCTGAAAGTTGCCTTCAAATCTTCCAACCATACAATATGTTTGAATCATTGTCTGTGTTAAGCATTGAAGATTGCCAGTTCTTAACAGATCTACCAAGCCTACGAGAAGTACCACTTTTAGCATATTTGTGTATTGATAATTGCACCAATTTGGTTAAAATTGATGGTTCAATTGGCTTTCTTGATAAGCTCCAACTCTTGAGTGCTAAACGGTGTAGCAAGCTAAAAATTCTAGCACCCTGCGTCATGTTGCCATCTCTTGAAATTTTGGACCTTCGGGGGTGCACATGTCTTGATAGCTTCCCGGAAGTATTGGGAAAGATGGAGAACATAAAAGAAATATATTTAGACGAGACAGCCATAGAGACACTGCCATGTTCAATTGGAAATTTTGTTGGGCTTCAACTTTTGTCCCTGAGGAAATGCGGAAGGCTTCATCAGCTACCAGGTAGTATATGTATATTGCCGAAAGTTAAAGTGATTTTCGGTTTTGGGCATGTGGTATATCGATTTTGGGAAGAGAACCAATATGAACAAGAGTTGAGCTTAGAAGTGTCTCCAAGGTCCATGGTTGTTGTTGATGGTGACCTGGATTTTACATATATTGACATGTATTATCCACACATAAGTCCAAATAATGTCATCCAAGTATGCAGTCCTAATCTGCTCTTGCATCATGATTTCATTTTGTTGTTCAAAAAGCTTGCAAGCAAGGATGGGAGCAGATGCAGGAAATCGTCAATGCATTTCTCGTTTCGAAACAAATTCCCCAAGATTGCGGTATGTTGTTCTGTATTGCCTAGTTTGAAAATTACCATGATATTGATTTTGAAGTTGGGCGTACTCATCAACGGCACTAAGATATTTAGTTCATCATGTAACTACTTATTTACACAAACATGGAACCCAAAACTTTGGTGTGATCTAGAAAGCAAAGCAGAGGGGATGTTTTCAGAGCAAGAATGGAATGAAGCTGAGATTTTGTTTGAGTTGGGATACCCCACACCATGTGCTGGATTAACAATGTCGCTCCACAACTTTGCTGAGGGACGTCTAAATTGGACCCTATTTGGTGTCTACGAGGAGGGAAATAATAAGGAGGATATTAAATTTAAAGATCCCATGTCAACCTTTTCATTCTGTAACATGCTCATGGAACCTCCCTCTTCATTACCTAGTTGTTTGTACTATGTTGTTAAATGA 3141 0.384 MAHRTAPSWSTFTLKWIYDVFLSFRGEDTRQKFTGNLYNSLCEKGVHTFIDDEGLRRGEEITPALLNAIQNSRIAIVVFSKNYASSTFCLDKLVKILECLKEEKGRSVFPIFYDVDPSHVRHQKGTYSEALAKHEERFPDDSDKVQKWRKALYEAANLSGWHFQHGYSILPFYCMCYKLISFYIFSIHMFYTMGRELEYKSIRKIVKEVYKRISCIPLHIADNPIGLEHAVLEVKSLLGHGSDVNIIGIYGIGGIGKTTISRAVYNLICSQFEGTCFLLDIREKAINKQGLVQLQEMLLSEVLKKKHIKVGDVNRGIPIIKRRLEKKKVLLVLDDVDKLEQLKVLAGESRWFGNGSIIIITTRDKHLLATHGVVKIYDVKPLNVAKALELFNWCAFKNHKADPLYVNIANRAVSYACGIPLALEVIGSHLFGKTKSLWAMGYECNSALDKYERIPHEKIHEILKVSYDGLEENEKQIFLDIACFFNTCGVGYVTSVLRAHGFHVKDGLRVLVDRSLLKIDASGCVRMHDLIRDTGREIVRQESTVEPGRRSRLWFEEDIVHVLEENTGTDKIEFIKLEGYNNIQVQWNGKALKEMKNLRILIIENTTFSTGPEHLPNSLRVLDWSCYPSPSLPADFNPKRVELLLMPESCLQIFQPYNMFESLSVLSIEDCQFLTDLPSLREVPLLAYLCIDNCTNLVKIDGSIGFLDKLQLLSAKRCSKLKILAPCVMLPSLEILDLRGCTCLDSFPEVLGKMENIKEIYLDETAIETLPCSIGNFVGLQLLSLRKCGRLHQLPGSICILPKVKVIFGFGHVVYRFWEENQYEQELSLEVSPRSMVVVDGDLDFTYIDMYYPHISPNNVIQVCSPNLLLHHDFILLFKKLASKDGSRCRKSSMHFSFRNKFPKIAVCCSVLPSLKITMILILKLGVLINGTKIFSSSCNYLFTQTWNPKLWCDLESKAEGMFSEQEWNEAEILFELGYPTPCAGLTMSLHNFAEGRLNWTLFGVYEEGNNKEDIKFKDPMSTFSFCNMLMEPPSSLPSCLYYVVK* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0634 1046 Gene3D - 382 471 IPR042197 -
Gso2g0634 1046 SMART till_3 17 158 IPR000157 GO:0007165
Gso2g0634 1046 Pfam TIR domain 18 154 IPR000157 GO:0007165
Gso2g0634 1046 PRINTS Disease resistance protein signature 246 261 - -
Gso2g0634 1046 PRINTS Disease resistance protein signature 323 337 - -
Gso2g0634 1046 PRINTS Disease resistance protein signature 416 430 - -
Gso2g0634 1046 PRINTS Disease resistance protein signature 728 744 - -
Gso2g0634 1046 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 765 - -
Gso2g0634 1046 ProSiteProfiles TIR domain profile. 16 156 IPR000157 GO:0007165
Gso2g0634 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 481 IPR027417 -
Gso2g0634 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Gso2g0634 1046 Pfam NB-ARC domain 231 468 IPR002182 GO:0043531
Gso2g0634 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 765 IPR044974 GO:0006952
Gso2g0634 1046 SUPERFAMILY L domain-like 577 811 - -
Gso2g0634 1046 Gene3D Ribonuclease Inhibitor 729 808 IPR032675 -
Gso2g0634 1046 Gene3D Ribonuclease Inhibitor 567 728 IPR032675 -
Gso2g0634 1046 SUPERFAMILY "Winged helix" DNA-binding domain 458 564 IPR036390 -
Gso2g0634 1046 Gene3D - 219 376 IPR027417 -
Gso2g0634 1046 SMART AAA_5 243 382 IPR003593 -
Gso2g0634 1046 Gene3D - 12 218 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0634 Gso-Chr2 6590509 6594460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0634 9 798 WRKY Transcription Factor Family AT4G12020 32.182 1.69e-91 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0634 - - gsj:114383909 2092