Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0630 ATGGAGAGAGAGTTGTGGGGTTCTGTTTTCATCTATTGGGTGTTATTAGCTCGCCCATTATGGTTGGTTTCTGCTAACATGGAAGGTGACGCCTTACATAGCCTGAGGACAAATTTACAGGATCCTAACAATGTTTTGCAAAGTTGGGACCCTACACTGGTCAATCCATGCACATGGTTTCATGTAACATGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGTTTTGTCTGGTCAACTTGTTCCACAGCTTGGTCAGCTCAAAAACTTACAGTATTTAGAACTTTACAGCAATAACATTAGTGGACCAATTCCAAATGACCTGGGGAATCTTACTAATTTGGTGAGCTTGGATCTGTATCTAAACCGTTTCAGTGGACCTATCCCAGAGTCATTGGGCAAGTTGTCAAAATTGCGCTTTCTCCGGCTTAACAACAACAGCCTGACTGGTCCTATTCCCATGCCACTGACTAATATTACAGCTCTCCAAGTGCTGGATTTGTCTAACAACCAACTATCAGGTGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGTTTTAACAACAACTTGGACCTATGTGGCCCAGTCACTGGGCATCCTTGTCCCGGGTCTCCTCCATTTTCTCCTCCTCCCCCTTTTGTCCCACCATCCCCAATCTCAGCTCCAGAAGGAAATAGTGCCACTGGTGCAATAGCTGGAGGAGTAGCTGCAGGTGCTGCTCTGTTATTTGCTGCTCCTGCAATTGTGTTTGCTTGGTGGCGTCGAAGGAAACCACAGGAGTTTTTCTTTGATGTGCCCGCTGAAGAGGATCCTGAAGTACACCTTGGGCAGCTTAAGAGGTTCTCATTACGAGAACTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGGGGAGGATTTGGTAAGGTTTACAAAGGACGTTTGACTGATGGTTCACTGGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACGCCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATTAGCATGGCTGTGCACCGAAATCTCCTCCGTTTACGTGGGTTCTGTATGACTCCTACTGAAAGGCTACTTGTATATCCTTACATGGCTAATGGTAGTGTTGCCTCATGCTTAAGAGAGCGTCCGGCACATCAACAACCCCTTGATTGGCCGACAAGGAAAAGAATAGCATTGGGATCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATTATTCATCGTGATGTAAAAGCTGCAAACATACTGTTGGACGAGGAGTTTGAGGCTGTTGTTGGAGATTTTGGGTTGGCTAAACTGATGGACTACAAGGACACCCATGTTACAACTGCTGTACGGGGCACAATTGGGCACATAGCACCAGAGTACCTGTCTACTGGTAAATCTTCAGAGAAAACAGACGTCTTTGGGTATGGTATAATGCTTCTGGAGCTAATCACTGGACAAAGGGCTTTTGACTTGGCTCGACTTGCAAATGATGATGATGTTATGTTGCTGGATTGGGTAAAAGGACTTCTGAAAGAAAAGAAGCTAGAAATGCTGGTTGATCCTGATCTCCATAGCAATTACATAGATGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTTTGCTCACAAGGTTCCCCTATGGACCGGCCTAAGATGTCAGAAGTGGTGCGAATGCTTGAAGGTGATGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTGCGCCAGGAAGTGGAGTTGGCCCCTCATCCCAATTCCGATTGGATTGTTGACTCAACTGAAAATCTACATGCAGTTGAGTTATCTGGTCCAAGGTGA 1875 0.4533 MERELWGSVFIYWVLLARPLWLVSANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAVLSGQLVPQLGQLKNLQYLELYSNNISGPIPNDLGNLTNLVSLDLYLNRFSGPIPESLGKLSKLRFLRLNNNSLTGPIPMPLTNITALQVLDLSNNQLSGVVPDNGSFSLFTPISFNNNLDLCGPVTGHPCPGSPPFSPPPPFVPPSPISAPEGNSATGAIAGGVAAGAALLFAAPAIVFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPAHQQPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLHSNYIDAEVEQLIQVALLCSQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0630 624 Gene3D Ribonuclease Inhibitor 24 211 IPR032675 -
Gso2g0630 624 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 14 624 IPR031048 GO:0004675|GO:0005102|GO:0006468
Gso2g0630 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 624 - -
Gso2g0630 624 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Gso2g0630 624 Gene3D Transferase(Phosphotransferase) domain 1 378 595 - -
Gso2g0630 624 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Gso2g0630 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Gso2g0630 624 ProSiteProfiles Protein kinase domain profile. 301 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0630 624 Pfam Protein kinase domain 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0630 624 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Gso2g0630 624 SUPERFAMILY L domain-like 29 192 - -
Gso2g0630 624 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515
Gso2g0630 624 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Gso2g0630 624 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0630 Gso-Chr2 6552824 6559312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0630 9 624 Receptor kinase-like Gene Family AT1G71830 88.853 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gso2g0630 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0630 K13418 - gmx:100813918 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0630 2 6552824 6559312 Gso20g1396 20 44125779 44133051 PCT
Gso2g0630 2 6552824 6559312 Gso10g1959 10 46602831 46609919 PCT
Gso20g1396 20 44125779 44133051 Gso2g0630 2 6552824 6559312 PCT
Gso10g1959 10 46602831 46609919 Gso2g0630 2 6552824 6559312 PCT