Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0625 ATGTTCCTCAAAACGCAATTTCTGTTCCTCACCCTTGCTTTAGCAACCACTACAGTCACCACCGCCATAGACCCAGGTTCTACCCTCGCAGCTTCTTCTTCCAACCAAACGTGGTCTTCTCCCAGCGGCACCTTCTCCCTCCGGTTCATCTCCGTTCAGCCACCGACCACTCCTCCTTCCTTCATCGCCGCCATCGTCTTCTCCGGCGGAGCTCCCGTGGTCTGGTCTGCCGGCAACGGCGCCGCCGTGGACTCCGCCGGGTCCCTCCAGTTCCTCCGCTCCGGTCACCTCCGTCTCTTCAACGGCTCCGGCGCCACCGTGTGGGACACCGGCACGGCGGGTGCTTCGTCAGCAACCCTTGAGGACAGTGGCAATTTGGTAATTTCAAACAGCACTGGCTCCCTATGGTCAAGCTTTGACCACCCCACTGATACCCTTGTGCCCTCTCAGAATTTCACCGTTGGTAAGGTTCTAAATTCTGAAAGTTACTCTTTTGGTCTTAGTTCAATTGGGAATTTGACCCTGAAATGGAACAATAGCATAGTGTACTGGACCCAGGGTTTGAACTCCTCTGTGAATGTGAGTTTGGATTCCCCTTCTTTGGGGTTGTTATCAATTGGGCTCTTGCAACTTTCTGATGCAAATTTGAGCCCTTCTATTGATGTTGCTTACAGTAGTGACTATGCTGAAGGGAATAGTGATGTGATGCGGGTGTTGAAGTTGGATAGTGATGGAAATTTGAGGATTTATAGTACTGCTAAGGGTAGTGGAGTTGCTACTGCTAGATGGGCTGCTGTTCTGGATCAATGTGAGGTTTACGCTTACTGTGGGAACTATGGTGTGTGTAGTTACAATGATTCAACCCCGGTTTGCGGCTGCCCGTCTGAGAATTTCGAGATGGTTGATCCGAATGATAGTAGGAAAGGGTGCAGGAGGAAGGCGAGTCTCAACAGTTGTCAAGGGAGTGCGACTATGTTGACACTGGATCATGCTGTTATCTTGAGTTACCCCCCTGAAGCTGCGTCGCAGTCATTTTTCTCGGGGATATCGGCGTGTAGAGGGAATTGTCTTTCCGGTTCACGTGCCTGTTTTGCATCTACTTCCTTGTCAGATGGCACGGGGCAGTGTGTGATGAGATCAGAAGATTTTGTTAGTGCATATCATAATCCTTCGCTGCCTAGCACTTCTTATGTCAAGGTTTGTCCGCCACTGGAGCCAAATCCGCCACCCTCTATGGGGGGTGTGAGGGAAAAGAGGTCCAGGGTGCCTGCTTGGGTTGTGGTGGTGGTTGTTTTGGGTACCCTTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGAACAGCACGAGGTTTGGTGGGTTATCTGCTCACTATGCGCTTCTTGAGTATGCTTCTGGTGCCCCAGTGCAGTTCTCGCACAAGGAGCTCCAACAAGCGACAAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGCACTGTGTATAGAGGAACTCTTGTTAACAAAACAGTTGTTGCTGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACCATAAGTAGTACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTCTGCTCGGAAGGGCGCCACCGGCTTCTGGTTTATGAATTCATGAAAAATGGGTCTCTTGATAATTTTCTATTCCTGACAGAACTGCATTCGGGAAATTTTTTGAACTGGGAGTATCGATACAACATTGCCCTGGGCACTGCAAGAGGCATCACATACCTACATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAATATTCTCTTGGATGAGAACTATGTTGCCAAAGTCTCAGATTTTGGTCTTGCAAAGCTCATTAATCCTAAGGACCACCGGCATCGGACCTTGACAAGTGTGAGAGGAACCAGAGGATATTTAGCCCCCGAGTGGCTTGCAAATCTTCCCATAACATCCAAATCTGATGTTTACAGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGGAGGAATTTTGATGTGTCAGAGGACACAAATAGGAAAAAGTTCTCCATTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATAAGTGGAATTTTGGACAAAAGATTAGCTGAGCAAGAAGTTGAAATGGAGCAAGTAAGAAGAGCAATTCAGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACGATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACAGAGCTTGAAAGGCCACCTGCCCCAAAATCAGTAATGGAAGGAGCTGTTAGTGGAACCAGCACATACTTTAGTAGCAATGCCAGTGCATTCTCCACAGTTGGAGTCTCACCCGCTGGTCCCTCCTCTTCATCATCATTTCAGACTAGTGTTGTTTCAACCTTCACCTTGGGAAGGAACCCTGAGAAGGCAACCTCGTCCCTTTTACAATCAGACACATGA 2511 0.4855 MFLKTQFLFLTLALATTTVTTAIDPGSTLAASSSNQTWSSPSGTFSLRFISVQPPTTPPSFIAAIVFSGGAPVVWSAGNGAAVDSAGSLQFLRSGHLRLFNGSGATVWDTGTAGASSATLEDSGNLVISNSTGSLWSSFDHPTDTLVPSQNFTVGKVLNSESYSFGLSSIGNLTLKWNNSIVYWTQGLNSSVNVSLDSPSLGLLSIGLLQLSDANLSPSIDVAYSSDYAEGNSDVMRVLKLDSDGNLRIYSTAKGSGVATARWAAVLDQCEVYAYCGNYGVCSYNDSTPVCGCPSENFEMVDPNDSRKGCRRKASLNSCQGSATMLTLDHAVILSYPPEAASQSFFSGISACRGNCLSGSRACFASTSLSDGTGQCVMRSEDFVSAYHNPSLPSTSYVKVCPPLEPNPPPSMGGVREKRSRVPAWVVVVVVLGTLLGLIALEGGLWMWCCRNSTRFGGLSAHYALLEYASGAPVQFSHKELQQATKGFKEKLGAGGFGTVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTELHSGNFLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEDTNRKKFSIWAYEEFEKGNISGILDKRLAEQEVEMEQVRRAIQASFWCIQEQPSQRPTMSRVLQMLEGVTELERPPAPKSVMEGAVSGTSTYFSSNASAFSTVGVSPAGPSSSSSFQTSVVSTFTLGRNPEKATSSLLQSDT* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0625 836 ProSiteProfiles Bulb-type lectin domain profile. 20 141 IPR001480 -
Gso2g0625 836 CDD STKc_IRAK 492 762 - -
Gso2g0625 836 Pfam S-locus glycoprotein domain 227 294 IPR000858 GO:0048544
Gso2g0625 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Gso2g0625 836 Gene3D - 16 140 IPR036426 -
Gso2g0625 836 Pfam Protein kinase domain 489 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0625 836 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 7 825 - -
Gso2g0625 836 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Gso2g0625 836 SMART serkin_6 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0625 836 PANTHER OS07G0415500 PROTEIN 7 825 - -
Gso2g0625 836 Gene3D Phosphorylase Kinase; domain 1 460 560 - -
Gso2g0625 836 PIRSF SRK 1 817 IPR024171 GO:0004674
Gso2g0625 836 ProSiteProfiles Protein kinase domain profile. 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0625 836 ProSiteProfiles Bulb-type lectin domain profile. 143 262 IPR001480 -
Gso2g0625 836 SMART blect_4 29 142 IPR001480 -
Gso2g0625 836 Gene3D Transferase(Phosphotransferase) domain 1 561 773 - -
Gso2g0625 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 188 IPR036426 -
Gso2g0625 836 Gene3D - 141 265 IPR036426 -
Gso2g0625 836 Pfam D-mannose binding lectin 73 158 IPR001480 -
Gso2g0625 836 CDD B_lectin 32 142 IPR001480 -
Gso2g0625 836 SUPERFAMILY Protein kinase-like (PK-like) 470 761 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0625 Gso-Chr2 6523984 6527004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0625 459 770 Receptor kinase-like Gene Family AT5G20050 44.000 2.50e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso2g0625 Pkinase 1.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0625 - - gmx:100795819 1587.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1268 16 32068564 32071756 Gso2g0625 2 6523984 6527004 GST