Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0622 ATGGAGGCGCCATCTCTCACCAAACCCAACGACCCAACAAAACCTTCCAACACTTCCAGCACCCTTAGTCTGGAGGGGGGGCCGGGCGAAGCGAGCCCACTCCGAAAAATGTTTGCGGTGGCGTCCATCGCCGCCGGCATACAGTTCGGGTGGGCTCTGCAGCTGTCTCTCTTAACCCCCTACGTTCAGCTCTTAGGAGTCCCCCACGCGGCGGCCTCCTTCATCTGGCTCTGTGGGCCCATCTCGGGGCTGGTGGTGCAGCCCATTGTGGGCTACTACAGCGACCACTGCACCTCTCGCTTCGGCCGAAGGCGCCCCTTCATCCTCGGAGGCGCCTTAGCCGTCGCCATCGCCGTGTTCCTCATCGGCTACGCGGCCGACATAGGACACTCCGCTGGCGACGACATAACTAAAAAAACCCGACCCCGTGCAGTTGGGGTCTTCGTCATAGGATTCTGGATCCTAGACGTGGCCAACAACATGCTCCAGGGACCCTGCCGCGCCTTTTTAGCTGACCTCGCTGCCGGCGACCAGCAAAAAACGAGAATCGCCAACGGTTTCTTCTCGTTCTTCATGGCCGTCGGCAACGTGCTTGGGTATGCTGCAGGGTCCTACAGCGGTCTCCACAAGATCTTCCCCTTCACGGAGACCAAGGCCTGTGACGTCTTCTGCGCAAACTTAAAAAGCTGTTTCTTTTTCTCGATCCTACTGCTTCTCTTTTTAGCAACTGTTGCTCTGCTCTACGTTAAGGACAAGCAAGTTGAAGCAATTCCTCTGGATGATGCCACTCAACCCTCTTGTTTCTTTCAGCTTTTCGGTGCTCTGAAAGAGCTCAAGAGACCGATGTGGATGCTGATGCTGGTCACAGCTGTGAACTGGGTGGGGTGGTTTCCTTACTTCCTTTTCGACACTGACTGGATGGGTCGTGAGGTCTACGGTGGAACTGCTGGGGAGGACGCGTACGCGAAGGGAGTGCGCGTGGGATCGTTAGGGCTGATGGTAAACGCCGTCGTGTTGGGCTTCATGTCGTTGGCGGTGGAGCCGTTGGGGAAGATGGTTGGGGGAGTGAAGAGGCTTTGGGCGATTGTGAACTTTATTCTCGCGATTGGGTTCGGAATGACGGTGGTGATCACCAAGGTGGCGGAGCACCAGCGCCGGATGAACCCCGCCGCCGTGGGCCACCCCTCCGAGGGGGTGGTGGTTGGGTCCATGGTTTTCTTTGGGGTTCTTGGAGTTCCTCTTGCGATTACTTTCAGTGTCCCTTTTGCTCTAGCATCAATATACTGCAGCGCTTCAGGAGCAGGACAAGGTTTATCTTTGGGAGTTCTCAATCTTGCAATTGTGGTACCACAGATGGTGGTGTCTGCATTAAGTGGTCCTTGGGATTCCTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCTGCGGCAGCCGCGTTGAGCGCCATAATGGCGATTGTCTTGCTGCCAACTCCAAAGCCAGCTGATGAGGCCAAGGCTTCAAGCATGATGGCAGGGGGCTTTCACTAG 1536 0.5645 MEAPSLTKPNDPTKPSNTSSTLSLEGGPGEASPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDHCTSRFGRRRPFILGGALAVAIAVFLIGYAADIGHSAGDDITKKTRPRAVGVFVIGFWILDVANNMLQGPCRAFLADLAAGDQQKTRIANGFFSFFMAVGNVLGYAAGSYSGLHKIFPFTETKACDVFCANLKSCFFFSILLLLFLATVALLYVKDKQVEAIPLDDATQPSCFFQLFGALKELKRPMWMLMLVTAVNWVGWFPYFLFDTDWMGREVYGGTAGEDAYAKGVRVGSLGLMVNAVVLGFMSLAVEPLGKMVGGVKRLWAIVNFILAIGFGMTVVITKVAEHQRRMNPAAVGHPSEGVVVGSMVFFGVLGVPLAITFSVPFALASIYCSASGAGQGLSLGVLNLAIVVPQMVVSALSGPWDSLFGGGNLPAFMVGAAAAALSAIMAIVLLPTPKPADEAKASSMMAGGFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0622 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 28 498 - -
Gso2g0622 511 PANTHER SUGAR TRANSPORTER 28 498 - -
Gso2g0622 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 495 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso2g0622 511 Gene3D MFS general substrate transporter like domains 32 492 IPR036259 -
Gso2g0622 511 MobiDBLite consensus disorder prediction 1 28 - -
Gso2g0622 511 SUPERFAMILY MFS general substrate transporter 36 496 IPR036259 -
Gso2g0622 511 MobiDBLite consensus disorder prediction 9 26 - -
Gso2g0622 511 CDD MFS_SLC45_SUC 37 474 - -
Gso2g0622 511 Pfam MFS/sugar transport protein 37 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0622 Gso-Chr2 6460123 6463595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0622 14 511 Sucrose Transporter Gene Family AT1G22710 63.189 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0622 K15378 - gmx:100784153 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1264 16 31960901 31963172 Gso2g0622 2 6460123 6463595 GST