Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0621 ATGGAACAACCTCCTTCGTCGTCTCTTCAGGTGGAGACAGCACAACAAGCAGGACCTAGTCCTCTCAGAAAAATGATCGCTGTCTCGTCAATCGCCGCGGGAATTCAATTCGGGTGGGCCCTACAGCTCTCTCTTTTGACACCCTACGTCCAGACCCTGGGCGTCCCCCACGCATGGGCCTCCTTCATTTGGCTCTGTGGCCCAATCTCTGGGCTGCTGGTGCAGCCCATTGTAGGGTACAGTAGCGACCGATGTAGATCTCGTTTCGGTCGCCGCCGTCCCTTCATCTTAGCCGGGGCCGTTGCTGTTGCCATCGCCGTCTTCCTAATTGGCTATGCAGCCGATATAGGACACGCAGCTGGCGACGACCTCGCAAAGAAGACCCGCCCACGGGCTGTTGCAATCTTCGTGGTCGGCTTCTGGATCCTGGACGTGGCCAACAACATGCTCCAGGGTCCATGCCGGGCATTTCTCGGCGACCTCGCCGCCGGGGACCACCGCAAGACGAGAACCGCCAACGCATTCTTCTCGTTCTTCATGGCCATCGGAAACGTCCTCGGCTACGCAGCAGGCTCCTACGACAAACTCCACCGCGCCTTCAAATTCACACAAACCGAAGCGTGTGACGTCTTCTGTGCAAATCTCAAGAGCTGTTTCTTCTTCTCAATTGTCCTTCTCCTCGTTCTTTGTTTCGTTGTGCTCACTTGCGTGGAAGACCCTCAGTTTACGCCACGTGGGGATGAGGACAATTACGAAAACGACGGCGTTTCGCGGTCGTGGTTTTCGTGCTTTGGTGAACTCTGCGGTGCGTTTAGGGGTCTAAAGAGGCCAATGTGGCTGCTGATGTTGGTGACCGCTATTAACTGGGTGGCGTGGTTCCCTTATGTGTTGTTCGACACTGATTGGATGGGGCGAGAGGTGTACGGTGGTAAGGTGGGGGACAAAGCATACGATTCCGGAGTGCATGTGGGGGCATTGGGGCTTATGCTGAACTCTGTGGTTTTGGCATTGATGTCGTTGGCGGTGGAACCCTTGGGTCGTTTGGTTGGGGGAGTTAAGTGGCTGTGGGGGATCGTTAACGTTATTCTCGCCGTTTGCATGGCAATGACGGTGCTTATCACAAAGGCTGCAGAACATGAACGCTTAAACGCCGTTTCCCTTGTTGGATATCCCTCACTTGGTGTCAAAGCTGCTGCATTGACTTTCTTCTCCGTCCTTGGTGTTCCTCTTGCGATTACTTACAGCGTCCCATTTGCTCTGGCATCCATATACTCCACCACTTCAGGAGCAGGCCAAGGTTTATCTTTGGGTGTCCTCAATGTTGCAATTGTCGTGCCACAGATGATAGTATCGGCTATAAGTGGACAGTGGGATAAATGGTTTGGTGGTGGCAACTTGCCGGCGTTTGTGCTGGGTGCCGTGGCAGCCGCCGTGAGTGCCGTGCTAGCGGTTGTTCTGCTGCCAAAACCAAAGCCAGCAGATGTGGCCAAGGTTTCTTCCGTCACTGCTGGGAGTTTCCATTAG 1524 0.5453 MEQPPSSSLQVETAQQAGPSPLRKMIAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCRSRFGRRRPFILAGAVAVAIAVFLIGYAADIGHAAGDDLAKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRAFKFTQTEACDVFCANLKSCFFFSIVLLLVLCFVVLTCVEDPQFTPRGDEDNYENDGVSRSWFSCFGELCGAFRGLKRPMWLLMLVTAINWVAWFPYVLFDTDWMGREVYGGKVGDKAYDSGVHVGALGLMLNSVVLALMSLAVEPLGRLVGGVKWLWGIVNVILAVCMAMTVLITKAAEHERLNAVSLVGYPSLGVKAAALTFFSVLGVPLAITYSVPFALASIYSTTSGAGQGLSLGVLNVAIVVPQMIVSAISGQWDKWFGGGNLPAFVLGAVAAAVSAVLAVVLLPKPKPADVAKVSSVTAGSFH* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0621 507 PANTHER SUGAR TRANSPORTER 1 494 - -
Gso2g0621 507 SUPERFAMILY MFS general substrate transporter 24 493 IPR036259 -
Gso2g0621 507 Gene3D MFS general substrate transporter like domains 19 490 IPR036259 -
Gso2g0621 507 CDD MFS_SLC45_SUC 25 469 - -
Gso2g0621 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 21 491 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso2g0621 507 Pfam MFS/sugar transport protein 31 291 - -
Gso2g0621 507 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0621 Gso-Chr2 6446468 6449845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0621 6 492 Sucrose Transporter Gene Family AT1G22710 64.575 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0621 K15378 - gmx:100782007 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1262 16 31928500 31931856 Gso2g0621 2 6446468 6449845 GST