Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0614 ATGCTGTCTATTATTCCTTTGGATATCTCGGTATCCTCAACTCTTGCCAAAGTCTCACCTTTCAATAACAGTTTTAAGAAACCAACCTCTTTCCCATCCAAGCTTTCACCTTCCTCTGATGAATTCTCTCTCCTTTCTCTCTCCCACTCAGGAATTTGCAGGGCTAGTCAAGTTGTTGATTTGTTCCCAACCGTGTCCCCCGAAATTATTGTCCGCGAGGCAAGGTTGGAGGACTACTGGGGAGTGGCAGAGACGCACTGCAAGTGCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTGAGGATAGACAGATTGGTGGTGGCTATGTTAGCAGCTATGTTAGCCGGATTCTTTAGGCCTAGAGATTGCAGAAGAATCTGTTTGGTGGCTGTTATTGACAGCTCACTTGATGAGTCATTTTCATTTGAAAGTGAGGGTCTCAAGATTGGTGGTTTTGATGGGAAATTCAGCCTCAACAAGGGCTATGTGGCTGGTATATTAACAGTAGACAATAATGCAGACTTTTTACCAAGAAAGGGGCCACGACGACATAGAAGGACTGGAATTGCATACATATCAAATGTGGCGGTCCGGGAAAATTTTCGGAGAAAGGGGATAGCTAAGAAATTGATAGCAAAGGCAGAGTGTCATGCCAGAAGTTGGGGCTGTCGTGCCATTGCATTGCACTGTGACTTGAACAATCCTGTGGCCACAATGTTATACAAAGGACAAGGTTACAAATGTATCATGGTTCCAGAAGGAGCAAATTGGCCTCAGCCAAGAACCTCACCAGACATCAGATTCAACTTCATGATGAAACTTCTCAAAAATTCACTTGGGAGGAAGTAA 855 0.4409 MLSIIPLDISVSSTLAKVSPFNNSFKKPTSFPSKLSPSSDEFSLLSLSHSGICRASQVVDLFPTVSPEIIVREARLEDYWGVAETHCKCFFPEYSFPLDFVLRIDRLVVAMLAAMLAGFFRPRDCRRICLVAVIDSSLDESFSFESEGLKIGGFDGKFSLNKGYVAGILTVDNNADFLPRKGPRRHRRTGIAYISNVAVRENFRRKGIAKKLIAKAECHARSWGCRAIALHCDLNNPVATMLYKGQGYKCIMVPEGANWPQPRTSPDIRFNFMMKLLKNSLGRK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0614 284 Gene3D - 70 260 - -
Gso2g0614 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 63 251 IPR016181 -
Gso2g0614 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 280 - -
Gso2g0614 284 Pfam Acetyltransferase (GNAT) family 145 248 IPR000182 GO:0016407
Gso2g0614 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 118 279 IPR000182 GO:0016407
Gso2g0614 284 CDD NAT_SF 184 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0614 Gso-Chr2 6368023 6371346 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso2g0614 Acetyltransf_1 1.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0614 - - gmx:100803930 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0614 2 6368023 6371346 Gso20g1456 20 44838242 44841070 PCT
Gso2g0614 2 6368023 6371346 Gso10g1894 10 45837133 45840428 PCT
Gso20g1456 20 44838242 44841070 Gso2g0614 2 6368023 6371346 PCT
Gso10g1894 10 45837133 45840428 Gso2g0614 2 6368023 6371346 PCT