Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0605 ATGTTTACTGAAGCTGTTCAAGAGCTTGATAAACAATATGCCAAGCTGGATAAGCTTTTGAAAAAGCTCCAGGATGCCCATGAGGAATCCAAAGCCGTGACCAAGGCTCCTTCCATGAAGGCTATAAAGCAGAGAATGGAGAAAGATGTTGATGAAGTTAAGAAAACTGCACATTACTTAAAGACCAAAATTGAAGAACTGGACAAAGAAAATTTGGCAAACGGGTGTGGAAAAGGATCAGGTGCTGACCGGTCAAGAACAGCAACAACCATTTCTTTAAAAAAGAAACTGAAAGATACTGAATTTCAGATCCTGAGAGAGGCCATCCATCAAGAGTATCGTGAGGTGGTTGAGAGACGTGTTTTTACAGCATGCCTACTCGACAATTGA 390 0.4103 MFTEAVQELDKQYAKLDKLLKKLQDAHEESKAVTKAPSMKAIKQRMEKDVDEVKKTAHYLKTKIEELDKENLANGCGKGSGADRSRTATTISLKKKLKDTEFQILREAIHQEYREVVERRVFTACLLDN* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0605 129 Gene3D - 1 121 - -
Gso2g0605 129 PANTHER SYNTAXIN 2 124 IPR045242 -
Gso2g0605 129 Coils Coil 6 36 - -
Gso2g0605 129 PANTHER SYNTAXIN-131-RELATED 2 124 - -
Gso2g0605 129 SMART SynN_4 1 114 IPR006011 GO:0016020
Gso2g0605 129 Pfam Syntaxin 2 124 IPR006011 GO:0016020
Gso2g0605 129 SUPERFAMILY t-snare proteins 2 120 IPR010989 GO:0016020|GO:0016192
Gso2g0605 129 Coils Coil 50 70 - -
Gso2g0605 129 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0605 Gso-Chr2 6288456 6291507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0605 2 125 SNARE and Associated Proteins AT3G03800 67.692 1.28e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0605 K08486 - gsj:114369973 235.728