Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0604 ATGGACACCTTGGCTGAAATTCAAGAGCAAGATGAAGCAGTTAGAGATGTTGAGAGTAAGCTTCTTGATTTACCACAGTTATTTAATCAGTTGATATTTCTGGATATTTCAGTGTTAGTGGATGCGCAAGGAGACATGCTTGACAACATAGAAACACAGGTTTCAAGTGCAGTGGATCACGTGCATCAAGGAAACAATGCCCTCCAGAAGGCAAAGAAACTACAAAGGAACTCTAGAAAATGGATGTGCATTGCAATCATGATCGTTGTTATAATAATTGTTGTTGCTATCATCAAACCACGGGTTACCAAAAACGGTGTATAG 324 0.392 MDTLAEIQEQDEAVRDVESKLLDLPQLFNQLIFLDISVLVDAQGDMLDNIETQVSSAVDHVHQGNNALQKAKKLQRNSRKWMCIAIMIVVIIIVVAIIKPRVTKNGV* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0604 107 Pfam Syntaxin 1 44 IPR006011 GO:0016020
Gso2g0604 107 PANTHER SYNTAXIN 1 98 IPR045242 -
Gso2g0604 107 Gene3D - 1 100 - -
Gso2g0604 107 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 32 71 IPR000727 -
Gso2g0604 107 CDD SNARE_syntaxin1-like 3 70 - -
Gso2g0604 107 SMART tSNARE_6 1 71 IPR000727 -
Gso2g0604 107 Pfam SNARE domain 45 95 IPR000727 -
Gso2g0604 107 SUPERFAMILY SNARE fusion complex 3 76 - -
Gso2g0604 107 PANTHER - 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0604 Gso-Chr2 6286624 6287997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0604 1 107 SNARE and Associated Proteins AT3G03800 60.909 9.25e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0604 K08486 - gmx:100791058 185.267