Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0602 ATGGATTTCACAGTGGAGAAGAAGGAATCAGAGAACAACGCCGAAAATGCTCACCCAACAACGTTAGATTCTTCTTCTCAATTGGCATCGGCACTTGATTCCAACAACAAAGAAATCGAAGAACGACAAGCTCGTGAACTCAAAGCCGGACTTCACCCCCTAAAGCAGCACAAGTTTGTCTTCTGGTACACTCGTCGAACACCTGGAGTTCGAAATCAAACATCATATGAGGACAACATAAAGAAAATTGTTGAATTTAGTACGGTTGAAGGATTTTGGGTCTGCTACTGCCATCTTGCTCGTCCTGCTTCTTTACCTAGTCCAACAGATTTGCACCTTTTCAAGGAAGGAATCCGTCCTCTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCTGGCCGTTTTTGGGAGGACCTGGTTCTTGCCTTGGTGGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAACGAGGATATATTGAGTGTCTGGAATCGCAATGCTTCAGACCATCAGGCTGTAATGGCTCTGAGAGATTCAATCAAACGTCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCCTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 699 0.4435 MDFTVEKKESENNAENAHPTTLDSSSQLASALDSNNKEIEERQARELKAGLHPLKQHKFVFWYTRRTPGVRNQTSYEDNIKKIVEFSTVEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0602 232 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 225 IPR023398 -
Gso2g0602 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso2g0602 232 SUPERFAMILY eIF4e-like 37 228 IPR023398 -
Gso2g0602 232 MobiDBLite consensus disorder prediction 15 34 - -
Gso2g0602 232 Pfam Eukaryotic initiation factor 4E 56 212 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso2g0602 232 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gso2g0602 232 PANTHER BNAA10G16710D PROTEIN 39 232 - -
Gso2g0602 232 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0602 Gso-Chr2 6271852 6274968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0602 40 232 Eukaryotic Initiation Factors Gene Family AT5G18110 86.010 1.49e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0602 K03259 - gmx:100817453 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1235 16 31679546 31682699 Gso2g0602 2 6271852 6274968 GST