Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0578 ATGGTTAGTGCAATAAAAGCAGCCATTGGAGATTTGGTGTTGACTTTCCTGTGGGTCTTCTTCTCTTCCATGTTGGGACTGGCCACCAACACCATAACAACAGCGCTCGATCTTCATCACGTTTCTTACAACGGTTTTGATTACCCTTCCGCTGTGATCATCACTTCGCTCATCTTTATCCTCGTTACCATCTTCACCTTCGTTGGCAATGCCTTGGGTGGCGCCAGCTTCAACCCCACCGCCAATGCTTCGTCCTACGCTGCCGGGCTCGGCTCCGACTCCCTCTTCTCAATGGCTCTCCGGTTCCCTGCTCAGGCACTGGGTTCAGTAGGTGGTGTTCTGGCGGTTATGGAGGTTATGCCACCAAAATACAGGCACTTGATTGGAGGGCCTTCTTTAAAGGTTAGCTTGCATACTGGAGCTATAGCAGAGGGGGTTCTGACATTTGTAATCACCTTTGTTGTTCTACTCATCATGATCAGGGGTCCTCGTAGTGAGGCGGTGAAGACTTGGTTGATGGCAATCTCAACTGTGGTTTTGATCACTGCTGGTTCTGCTTACACAGGACCAGCAATGAATCCTGCCTTTGCATTTGGTTGGGCATACTTTGAAAACTGGCACAACACATGGGACCAATTCTATGTATACTGGATTTGCCCCTTCTTTGGAGCAATACTAGCTGCATGGCTGTTCCGAATTGTCATTCCTCCAGCCCCAAGAGTGGTAAAGCAGAAGAAAGCCTGA 744 0.4919 MVSAIKAAIGDLVLTFLWVFFSSMLGLATNTITTALDLHHVSYNGFDYPSAVIITSLIFILVTIFTFVGNALGGASFNPTANASSYAAGLGSDSLFSMALRFPAQALGSVGGVLAVMEVMPPKYRHLIGGPSLKVSLHTGAIAEGVLTFVITFVVLLIMIRGPRSEAVKTWLMAISTVVLITAGSAYTGPAMNPAFAFGWAYFENWHNTWDQFYVYWICPFFGAILAAWLFRIVIPPAPRVVKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0578 247 SUPERFAMILY Aquaporin-like 3 240 IPR023271 -
Gso2g0578 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso2g0578 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Gso2g0578 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Gso2g0578 247 Gene3D Glycerol uptake facilitator protein. 1 246 IPR023271 -
Gso2g0578 247 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0578 Gso-Chr2 6042514 6046812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0578 2 246 Major Intrinsic Protein MIP AT5G18290 52.846 2.07e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0578 K09875 - gmx:100803227 488.804