Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0574 ATGAGAAGCTCTAATAATAACCATGATGCTCCTCCACCTCCACCTCTACTTCAAGACCTGAAGGTGATCATCCACAATGCCTCCATGATTTTCCCATCCAAAGAGATCGAGAGAAAGTCCCTTTTCTTGTCAAACATTGACAAGGTCCTCAGCTTCGATGTGGAAACGGTTCACTTCTTTGGTGCCCACAAAGATTTTCCTCCTCGTGTTGTGAATGAGAGGCTAAAGAATGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGATTGAAGCTCAACTTTGACACCAAAAGATTGGAGATGGATTGTAATTCTGAGGGAGCTGGGTTCGTGGTGGCATCCAGCGAGTACAATTTGGATCAGATAGGAGATTTGGATTATCCAAATCCAGCTTTTGCACAATTGGTACAAAAGAATAAGGATTTTCTTAAACACGGTGATGTCCCACTCTGTGTTGCCCAGGTGACATCCTTCAAGTGTGGCGGTTTTGCAATTGGCATCTCTACTAGCCACACCACCTTTGATGGCCTCAGCTTCAAAACCTTTCTAGACAACATTGCTTCAATAGCCTCTAAAAAGCCCTTGGTTGTCATGCCCTGCCATGACAGGCACCTCCTAGCCGCCCGATCCCCACCATGTGTCACCTTCCCACACCCTGAGATGCTCAAGCTAAGTGACCTCCCAACATGCCCCGACTCCAACATCTTTGAGGCCTCCACCGAACAACTTGACTTCAAGGTCTTCAAACTAACATCAAACGACATCACAAAATTGAAGGAAGAGGCTAAGAATTCTTCAACTAGTGGTGGCACAAGTACTACATGTGTCACTGGCTTTAACGTTATCACTGCCCATATATGGAGATGCAAGGCACTATCTTGCGAAGATGATAACCCTAATAGGTCATCAACTATACTATATGCTGTGGATATACGTTCAAGATTGAACCCTCCATTGCCTAAATCATACGCGGGTAACGCAGTGTTAACCGCTTATGCCACGACAAAGTGTAAGGAATTAGAAGAATTACCTTTTATGAAACTAGTTGAAATGGTGCGTGAGGGAGCAACTAGGATGACAAATGAGTATGCAAGGTCTATCATAGATTGGGGAGAGACAAACAAAGGGTGTCCCAATGGGGAGGTTTTGGTTTCTTCATGGTGGAGATTGGGGTTTGAGGAAGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGTCCAGTGGTGTATCATAGGAAGGATATTATTTTGTTGTTTCCTCCCATTGATGGAGGTGGAGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCTATGGGCTCTTCAACAAGTTCTTGACTTTAGATTGA 1371 0.4464 MRSSNNNHDAPPPPPLLQDLKVIIHNASMIFPSKEIERKSLFLSNIDKVLSFDVETVHFFGAHKDFPPRVVNERLKNALEDALVVYDFLGGRLKLNFDTKRLEMDCNSEGAGFVVASSEYNLDQIGDLDYPNPAFAQLVQKNKDFLKHGDVPLCVAQVTSFKCGGFAIGISTSHTTFDGLSFKTFLDNIASIASKKPLVVMPCHDRHLLAARSPPCVTFPHPEMLKLSDLPTCPDSNIFEASTEQLDFKVFKLTSNDITKLKEEAKNSSTSGGTSTTCVTGFNVITAHIWRCKALSCEDDNPNRSSTILYAVDIRSRLNPPLPKSYAGNAVLTAYATTKCKELEELPFMKLVEMVREGATRMTNEYARSIIDWGETNKGCPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILLFPPIDGGGGVSIIVALPPKEMEKFYGLFNKFLTLD* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0574 456 Gene3D - 20 225 IPR023213 -
Gso2g0574 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 453 - -
Gso2g0574 456 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 18 453 - -
Gso2g0574 456 Pfam Transferase family 21 445 - -
Gso2g0574 456 Gene3D - 235 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0574 Gso-Chr2 5981024 5995798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0574 20 453 Monolignol Biosynthesis Gene Families AT5G48930 30.820 1.03e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0574 K13065 - gmx:100499712 906.36