Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0559 ATGGATGGACTAGCTAGCAGGAGTGACACTATTGTGGAACAACACATGGTAAGCATTTTATCTTCTTACACAGTGATTCCCAGCGAGGCTACACCAAATTTGTTACCTGAGAGTGAGCAAATCAATGCTCCCACTCATTCACTTACCATCTACGTCTACAAGCCAAATTGTCCCAACAAAATTATCCCCATTCCCAACATGGTTGACACAATGAGAGACTCTCTTGCCAAGATCTTAGTTCACTATTACCCACTAACTGGCCGGCTACGCTTGACAAAAGTGGAGTGTAATGCAAAGGGCGTGCTATTGTTGGAAGCTGAATCCATAAGAGCACTTGATGACTACGGTGACTTTGAACCCAACGACACCATCAAAGACCTTATTCCCAAAGTTGACTACACCGAACCCATTGAGAATTCGCCATTGCTTCTGGTGCAATTAACAAGATTTTCCAGCAGCGGTGGCTTCTGTGTTGGCATTGCCATTTCCAATGTCATTGTTGATGGAATTTCCGATACTCACTTCATCAACTCATGGGCAACGCTGGCTCGAGGAGGCACCTTAGAGGAACACGACATGCCACTTCTGAGCAAAGTGGTTCTAAGTTCGGACACGAAACCATGTTTTGACCACAAAGAATTCAAGCTATTGCCACTTGTGCTAGGTCACGCTGACACCACTGAGGAGGGTAACAAGGAAACAACACTTGCAATGTTGAAACTAACAAGACAAATGGTCGACAAGCTGAAGAAGAAAGCCAATGAGGGCAACGAAGGTCGAGCTTATAGTATATACGAGACCATTTCAGCTCATATATGGCGATGTGTCGGTCAGTATTACAAAAACTAA 849 0.4441 MDGLASRSDTIVEQHMVSILSSYTVIPSEATPNLLPESEQINAPTHSLTIYVYKPNCPNKIIPIPNMVDTMRDSLAKILVHYYPLTGRLRLTKVECNAKGVLLLEAESIRALDDYGDFEPNDTIKDLIPKVDYTEPIENSPLLLVQLTRFSSSGGFCVGIAISNVIVDGISDTHFINSWATLARGGTLEEHDMPLLSKVVLSSDTKPCFDHKEFKLLPLVLGHADTTEEGNKETTLAMLKLTRQMVDKLKKKANEGNEGRAYSIYETISAHIWRCVGQYYKN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0559 282 Gene3D - 11 216 IPR023213 -
Gso2g0559 282 Gene3D - 223 279 IPR023213 -
Gso2g0559 282 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 20 277 - -
Gso2g0559 282 Pfam Transferase family 16 277 - -
Gso2g0559 282 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0559 Gso-Chr2 5860089 5861438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0559 17 278 Monolignol Biosynthesis Gene Families AT5G48930 33.577 9.38e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0559 K13065 - gmx:100778266 556.984