Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0541 ATGGAGAAGAACCTTGCCGAGAATTCTGGCAAAGCCGAAGACATGAACACCGGCGACAACACTACCAATTCGCCGGCAGCGCCGGAGCCCGAAGATAATAAACTCGACGCCAAAACGGACGGCGAAGGAGAAAAAGCCGCGGATTCAGATCACGCCGAGGGAGACCAAGATCCCAAAGAGGAAGAGAAGAAGGAAGAAGAAGAAGAAGAAACCGCGGAGGCTCCACCGGATTCTCCCCCTCCAAACCTCGAGAAGGTTTCAGAAGACATTGACAAATTGCTCGCCACTCAGCAACACAATGCAGATGCTAACAAGAAAGAAGTCACCACATTCGATACGCCTAATTTCATCCCCATTTTCTTGCAACTAGTGGAAGAGAAAATGAAGAGGTACGAAACAAATGAGGCAAAATTGGGTGAGAATGCGGAAGAGAAATCGTCGTTTCTGGAATGCGTGAATCGCATCTCAAAGCTGATGAAACATTTCTCGGAGTACGCTCAATCTCATCAAGAGGAAGATCAAGAAGAAAACAAGGACAAGGTCAAGGGAAAAACAGACTTGATAATCAACGGCCTCGGCGCGCTTCAGCAGCGTGCGATGTCGTTTTTGGAGGACGAGTTTCGGTCTCTAATGGAAGAATCTAGAAACCAAGCCAAACCCGCAGAGCAAAACCAGAACCAGAAGGGGAAACAACAACAAGTGGCGGAATCTTCTGAGCCCGAGTCACCTGCAGAAATGGTTACGGATTTCCCGGGTTTACCGGAGGAAACGGTTACGAAACTGAGCAAAATAGCTAAAGAAATGATCACAGGCGGTTACGGAAAAGAGTGCTGCCATGTCTACGCGCTTTCGCGAAGGCACGCGTTCGAAGACGGAATGCACAAGCTACTAGGTTACGAGAAGCTCAGCATCGATGAAGTTCAGAAAATGCAGTGGGAGCCACTGGAGCGCGAGATCCCACTGTGGATCAACACGTGGAAGGAATGCACCTCCGTGTGGTTCCCTGGCGAGTGGAGGCTCGCGGAGTCAGTGTTCGGCGAAGAGAAGGAGCAAGATTCTTCCCTATCGACGAACAATATCGCGGCGAGCCTCTTTGCTAACCTCTCCCGCGGAATCATGATCCAGCTTCTCAATTTCGCGGAGAGTGTCGCCATGACGAAGCGCGCCAGCGAGAAGCTCTTCAAGTTCCTCGACATGTACGAGACCTTGAGGGACGTTATTCCCGACATGGAGAGCCTCTTCCCCGCCGACGACGGGGAGATCAAGGCCGAGACGACCTCGGCCAAGTGCCGCCTCGGCGAGGCGGCGGTGCTGATATTCTGTGACCTCGAGAACTCTATCAAATCGGAAACCGGAAAAACTCCGGTAGCCGGCGGCGCGGTGCATCCCCTCACGCGCTACATCATGAACTACTTAAGGCTAGCGTGTGAATACAAAGACACTTTAGAAGAAGTGTTCAAAGAACACTCCAAAATGGAGCGGGCAGATTCAACAAGCAGGCCACAATACGAAGATACCAAACCAAACAACAACAACAAACAGAAAGAAAACGTGTCACCTTTCGCGGCGCAGTTAATGAGGGTGATGGAGCTTCTGGACACAAATCTCGAAGGAAAAGCGAAGCTGTACAAAGAAGTACCACTGAGCTGCATATTCATGATGAACAACGGAAGGTACATAGTTCAGAAGATAAAAGGCTCTACGGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGCAAGAGATCGACGGAGCTGAGAACTTACCACAAGAACTACCAGGTTGAAACGTGGAGCAAGATTCTGAGTTCTCTTAGCCCTAAAGGTTTGAACGAGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGCGCTTCAAGAGCTTCAACGCGGCGTTTGAGGAGATTCACAAGACGCAGAGCGCGTGGGTGGTGTACGACGAACAGCTTCAGTCGGAGCTTAGGGTTTCTATTTCCGCGCTCGTGATTCCGGCGTACAGGTCCTTCTTGGGAAGGTTTTCGCAATACTTAGATCCCGGAAGGCAAACTGTAAAATATATTAAGTATCAAGCTGAAGATGTTGAGACTTGCATTGATGAGTTGTTTGATGGGAACCCTCATGGGCGTCGCTAG 2130 0.5033 MEKNLAENSGKAEDMNTGDNTTNSPAAPEPEDNKLDAKTDGEGEKAADSDHAEGDQDPKEEEKKEEEEEETAEAPPDSPPPNLEKVSEDIDKLLATQQHNADANKKEVTTFDTPNFIPIFLQLVEEKMKRYETNEAKLGENAEEKSSFLECVNRISKLMKHFSEYAQSHQEEDQEENKDKVKGKTDLIINGLGALQQRAMSFLEDEFRSLMEESRNQAKPAEQNQNQKGKQQQVAESSEPESPAEMVTDFPGLPEETVTKLSKIAKEMITGGYGKECCHVYALSRRHAFEDGMHKLLGYEKLSIDEVQKMQWEPLEREIPLWINTWKECTSVWFPGEWRLAESVFGEEKEQDSSLSTNNIAASLFANLSRGIMIQLLNFAESVAMTKRASEKLFKFLDMYETLRDVIPDMESLFPADDGEIKAETTSAKCRLGEAAVLIFCDLENSIKSETGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKMERADSTSRPQYEDTKPNNNNKQKENVSPFAAQLMRVMELLDTNLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSTEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSSLSPKGLNENGKVHKPVLKERFKSFNAAFEEIHKTQSAWVVYDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTVKYIKYQAEDVETCIDELFDGNPHGRR* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0541 709 MobiDBLite consensus disorder prediction 216 239 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 93 107 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 212 252 - -
Gso2g0541 709 SUPERFAMILY Cullin repeat-like 139 702 IPR016159 -
Gso2g0541 709 MobiDBLite consensus disorder prediction 1 107 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 10 28 - -
Gso2g0541 709 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 709 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 489 517 - -
Gso2g0541 709 Gene3D Exocyst complex component Exo70 127 709 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 31 59 - -
Gso2g0541 709 MobiDBLite consensus disorder prediction 60 74 - -
Gso2g0541 709 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 709 IPR004140 GO:0000145|GO:0006887
Gso2g0541 709 MobiDBLite consensus disorder prediction 502 517 - -
Gso2g0541 709 Pfam Exo70 exocyst complex subunit 322 699 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso2g0541 709 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0541 Gso-Chr2 5711796 5714289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0541 1 704 EXO70 exocyst subunit family AT5G13990 48.977 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0541 K07195 - gmx:100819960 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0842 19 34137021 34139587 Gso2g0541 2 5711796 5714289 PCT
Gso16g0431 16 5015018 5017585 Gso2g0541 2 5711796 5714289 PCT
Gso2g0541 2 5711796 5714289 Gso19g0842 19 34137021 34139587 PCT
Gso2g0541 2 5711796 5714289 Gso16g0431 16 5015018 5017585 PCT