Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0514 ATGTTTCACTACAACACAAAGTTCGCTATGGTTCTCACTATCTTTATCTTCATGTTCTGTTTGCGCTGTTCAACGAGTGCCAAAAGTAACAAGAACAACTGCGAGCGCAGCTGCGGAGAACATTCCCTGCAATACCCTTTTGGCTTCTCTTCTGACTGCGAAGTCAAACTAAATTGCAGCAAAGAGAACAAAGTCAAGATCGGTGATTTAGAGGTTCAGAGTGTGACCTCTGATGGCATATTCGTTAGTCTTCCGGTGCAGTGCAACCGCAACGTGAGTTTCTTAGACCCTCTCTTTCGACACAACTTTGCTCCCTCGTGGAGCAACACCTTTCTGGTGCAGAGCTGCGAGTCCAACCTCAGTGGCTGCGTTATTCCCACATCGAGTTTCGCTGGCGGCCGCAACAAGGTGGAGGGCTGTGACCGCGAAAGTGAAGATCTTCATTGCTTCACGCAGATGCGGAAGAGTAAGAGTAATGGCTCCAGAGAAGATGATGATGTTCTCATGCGCCTAGATTGGGAGCGAGTTGGTTGTAAATTCTTGTTCTCTGCTCTTGCTTTTGATAGGAGTAAAGTGAAGGAGCTCTCGCTCCAATTTCAGATGGTTGAGTTGGGGTGGTGGCTTGAAGGAAACTGTAGTTGCTCCAACAATGCATCCTGCACGGAGGTGAATCATGGTGGAGGAAAACTGGGCTTCCGGTGCCGCTGCGATGAAGGTTTCGTCGGAGACGGATTCAAGGACGGCGATGGTTGCCGGAGAGTTTCTGAATGCAAAGCTTCAACACTATGGTCTGGCGGATGTAGGAAAGCAGTCAAAATTGGTGTCTTTGTTGGAGGGATCATAGTTGGAGCTATCCTTGTGGCTGCTCTGTCTCTTGTATGTTACTTTAATAGGCGTCGTTCCTCTTGGCTGAGAAAACAAGTAACAGTAAAGCGCCTATTACGCGAAGCTGCAGGAGACTCAACTGTCCCTCTATATCCCTACAAAGAAATAGAAAGAGCCACAAGTTTTTTCTCTGAAAAACATAGGCTGGGAACTGGAGCTTTCGGCACAGTTTATGCTGGACACCTTCACAATGATGAGTGTGTTGCTATAAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCGGTGAGTCACCCGAATTTGGTGCGCCTCTTAGGTTGCTGCATAGAAGGGGGAGAGCAGATACTTGTTTATGAGTACATGCCTAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGTGGAGTACTTCCTTGGACAATAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTCCATTCAGAAATTAATCCTCCAATTTATCACAGAGACATAAAATCCAGTAATATACTCTTGGACTATAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCGACCGCCCCACAAGGGACCCCGGGCTATGTTGATCCTCAATACCACCAGAACTTCCACCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCATGAAAGTGGTTGATTTTGCACGGCCTCAGAGTGAAATCAACTTGGCTGCACTTGCTGTTGATAGGATCAGGAAGGGTTGCATAGATGACATCATTGATCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCCATTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTAGAACTTATCAGGCGCAGCGGGTGGGCAACTATGGAGGAAACCATATGCACAGCTTCATCGGTTGGATCTGTGTGTTCGTCACCCCGAAATGGAAGTGTGAATTCACTTAGAGGTGTTAGTTTTGAGAGAGCTGCAGGACTTGGGAGTGAGACATTGATTGTTCCCCACAAGACTGATATGTTTTTGCAATCAATTGAGGAGGTGAAGGACAGCTCTCCTGTGTCTGTGCAAGATACTTGGTTAAGTGGAACTAGTTCACCCTCAACAAATAGCTTGTTAGGACATGTTGTTCAGTGA 2127 0.4589 MFHYNTKFAMVLTIFIFMFCLRCSTSAKSNKNNCERSCGEHSLQYPFGFSSDCEVKLNCSKENKVKIGDLEVQSVTSDGIFVSLPVQCNRNVSFLDPLFRHNFAPSWSNTFLVQSCESNLSGCVIPTSSFAGGRNKVEGCDRESEDLHCFTQMRKSKSNGSREDDDVLMRLDWERVGCKFLFSALAFDRSKVKELSLQFQMVELGWWLEGNCSCSNNASCTEVNHGGGKLGFRCRCDEGFVGDGFKDGDGCRRVSECKASTLWSGGCRKAVKIGVFVGGIIVGAILVAALSLVCYFNRRRSSWLRKQVTVKRLLREAAGDSTVPLYPYKEIERATSFFSEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSQHLQRERGGVLPWTIRLTIATETANAIAYLHSEINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEINLAALAVDRIRKGCIDDIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMIEVAEELELIRRSGWATMEETICTASSVGSVCSSPRNGSVNSLRGVSFERAAGLGSETLIVPHKTDMFLQSIEEVKDSSPVSVQDTWLSGTSSPSTNSLLGHVVQ* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0514 708 Gene3D Transferase(Phosphotransferase) domain 1 414 629 - -
Gso2g0514 708 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 15 689 - -
Gso2g0514 708 Gene3D Phosphorylase Kinase; domain 1 299 413 - -
Gso2g0514 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Gso2g0514 708 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 689 IPR045274 GO:0007166
Gso2g0514 708 Pfam Protein kinase domain 339 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0514 708 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Gso2g0514 708 SUPERFAMILY Protein kinase-like (PK-like) 321 613 IPR011009 -
Gso2g0514 708 SMART serkin_6 338 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0514 708 ProSiteProfiles Protein kinase domain profile. 338 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0514 Gso-Chr2 5485668 5490301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0514 1 706 Receptor kinase-like Gene Family AT2G23450 54.646 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso2g0514 Pkinase 4.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0514 - - gmx:100810861 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0514 2 5485668 5490301 Gso16g1155 16 30669054 30673981 GST