Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0503 ATGGGAATAGCAACACCTTCTTCATCGCTTCCTTCCATTCTCTCTCAATCGAAGACACAACAACAAATACATCATTCGAATTCTTCTATGTCCCAAGATTACCACCACCACCACCAAGGAATCTTCAGCTTCCCGAATGGGTTCGAAAGATCGGCGGCGGCCACTACGATGACTCACCAAGACCCTCACCAACAGCAGATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCCACCGCCGTCGCATCAAACTTTGGTACCTATAGAGGAAGACGAATCGGGAAGCCTCCCGGTGTACGAAACCGCCGGGATGTTATCGGAGATGTTCAATTTCACTCCCGGCGCCACGGAATTATTGGAACAGCAACAGCAGCAACAACAACCAATGGCGACGACGACGGCCAGGGCAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAACAGACAGGGGATGTTAAGCAATTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATGGCAGTGTGAATAGCCGTGACAGTAGCAGCAGCAGCATAGTTCAGAATCAGCATCATCATCATCACAACCACCACCATCATCAAATGTCGAGCATTAATGCGGACTCAGCAGCTGCCATGCAGCTTTTTCTCATGAACCCTCAAACCACCAGATCCCCTTCTCCCCCTCCACCTCCTCCTCCTTCTTCTTCTACTCTCCACATGCTGCTTCCTAATACTTTCCCTCCTGGCTCAGGAGGGTCTTTCGGTCAATTCACGTGGCTCCCCGACACCACTCAAGAAGGAGGACCGAGTACAGTCGTGGAAGGCCCTGGCCACGGTCACGGTCAAGGCCTTTCTCTGTCCCTGTCCTCCTCCATAGAAGCCGCAAAAGCGGAGGAACTAAGGATGGGGGATAGTGGGTTTTTGTATTACAATCAAGCAAGTGGAGGACCCTCTTCCTATAAGAGTACTCTTGGGGGTCATCACCACCAAGCATTGTTGGGACAAGCCCACCAGGGAAATGTTGGGTTTGGAGCAGCATCATCGTCTACATCATCATTAGGTGTTGTGAATGCGTTGAGGAATTCAAAATATGCCAAGGCTGCTCAGGAGTTGCTTGAAGAGTTTTGCAGTGTTGGGAGAGGCCAGTTCAAGAAGAACAAGTTTAACAGACAACTCTCAAACCCTAGTTCCAATCTTGGAGGTAGTGGCGGTGGTGGCGGCGGCGCTTCTTCGTCTTCATCAAAGGATATTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGGAGGAAGGTCAAACTCCTAACCATGCTTGACGAGGTGGATAGGAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACTCATTCGACATGGTGATGGGGTTCGGCGCGGCGGTGCCATACACGGCGCTGGCTCAGAAAGCAATGTCTCGTCACTTTAGGTGCCTGAAGGATGCAATAACAGCACAATTGAAGCATAGTTGTGAGGTGTTGGGAGAGAAAGATGGTGCAGGGAACTCGGGGTTGACCAAAGGAGAGACACCAAGGCTGAAGATGTTGGAACAAAGCTTGAGGCAGCAAAGAGCGTTTCATCAAATGGGGATGATGGAACAGGAGGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTAGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCGAGGGTTCGTTTGTGGAAACCCATGGTGGAAGACATGTACCAACAAGAACTCAAAGAGGCCGAAGGGGCAGAAGAAGATAGAGAGAGGAACCAAAGCAGTAGCAACAACAGTGGCCACCAATTGGCACAAACTCCAACACCCTCAACCACGGCATCGACAGCAACAGCGCCACCACCAACAACAACGACACCACCAAACGGAAAAAGATCCGATACCGAAAGCGACCCTTCACTCGCACAGATAAATAACACCACCAGCACCACCGTCATGACGGTCACCGCCACTCAGGTGACGCCACCGTCGGAGCTTCCCCGAACAATGGTGGCCGATGAATCGTGCAGGCATGGTAGCCTCGTTGCAACGGATTTTGGGACCGCTTCTGCTGCTTCTGACATTGGCTCCACTCTGATTAGGTTTGGGACCACCACCGGTGACGTGTCACTCACGCTAGGGCTTCGCCACGCCGGGAACATGCCGGAGAAAACTCCGTTCTCCGTTAGGGACTTTGGAGGCATTTAA 2301 0.5154 MGIATPSSSLPSILSQSKTQQQIHHSNSSMSQDYHHHHQGIFSFPNGFERSAAATTMTHQDPHQQQIRRDKVRVQGFEPPPSHQTLVPIEEDESGSLPVYETAGMLSEMFNFTPGATELLEQQQQQQQPMATTTARAVGSGGSEWYGNRQGMLSNLGPLGDSKNHHHHGSVNSRDSSSSSIVQNQHHHHHNHHHHQMSSINADSAAAMQLFLMNPQTTRSPSPPPPPPPSSSTLHMLLPNTFPPGSGGSFGQFTWLPDTTQEGGPSTVVEGPGHGHGQGLSLSLSSSIEAAKAEELRMGDSGFLYYNQASGGPSSYKSTLGGHHHQALLGQAHQGNVGFGAASSSTSSLGVVNALRNSKYAKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNLGGSGGGGGGASSSSSKDIPPLSAADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDMVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCEVLGEKDGAGNSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEEDRERNQSSSNNSGHQLAQTPTPSTTASTATAPPPTTTTPPNGKRSDTESDPSLAQINNTTSTTVMTVTATQVTPPSELPRTMVADESCRHGSLVATDFGTASAASDIGSTLIRFGTTTGDVSLTLGLRHAGNMPEKTPFSVRDFGGI* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0503 766 Pfam Associated with HOX 355 488 IPR006563 -
Gso2g0503 766 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 84 755 - -
Gso2g0503 766 Gene3D - 544 606 - -
Gso2g0503 766 Pfam Homeobox KN domain 558 597 IPR008422 GO:0003677|GO:0006355
Gso2g0503 766 MobiDBLite consensus disorder prediction 384 414 - -
Gso2g0503 766 MobiDBLite consensus disorder prediction 613 681 - -
Gso2g0503 766 CDD homeodomain 541 602 IPR001356 GO:0003677
Gso2g0503 766 MobiDBLite consensus disorder prediction 130 200 - -
Gso2g0503 766 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 84 755 - -
Gso2g0503 766 MobiDBLite consensus disorder prediction 659 681 - -
Gso2g0503 766 SUPERFAMILY Homeodomain-like 543 608 IPR009057 -
Gso2g0503 766 SMART HOX_1 541 605 IPR001356 GO:0003677
Gso2g0503 766 MobiDBLite consensus disorder prediction 1 36 - -
Gso2g0503 766 MobiDBLite consensus disorder prediction 215 243 - -
Gso2g0503 766 MobiDBLite consensus disorder prediction 627 651 - -
Gso2g0503 766 ProSiteProfiles 'Homeobox' domain profile. 538 601 IPR001356 GO:0003677
Gso2g0503 766 MobiDBLite consensus disorder prediction 218 233 - -
Gso2g0503 766 MobiDBLite consensus disorder prediction 1 44 - -
Gso2g0503 766 SMART prehox3 349 489 IPR006563 -
Gso2g0503 766 MobiDBLite consensus disorder prediction 384 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0503 Gso-Chr2 5347053 5355693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0503 349 766 Homeobox Transcription Factor Family AT2G23760 54.412 1.31e-147 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gso2g0503 POX 2.4e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0503 - - gmx:100807143 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0503 2 5347053 5355693 Gso16g1145 16 30468856 30477325 GST
Gso1g1545 1 52129796 52137213 Gso2g0503 2 5347053 5355693 PCT
Gso11g0530 11 4740128 4748287 Gso2g0503 2 5347053 5355693 PCT
Gso2g0503 2 5347053 5355693 Gso1g1545 1 52129796 52137213 PCT
Gso2g0503 2 5347053 5355693 Gso11g0530 11 4740128 4748287 PCT