Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0491 ATGGGGGCTGGGGAAGAGAGTACAGCTAAATCTTCTAAAGTATCTTCGGCAGCTCAGGAGACACCAACAGCACTTGCATATCCTGACTGGTCAAGCTCCATGCAGGCCTATTATGCTCCTGGAGGCACTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCCTATTTATGGGGAAGCCAGCATCCTTTGATGCCGCCATATGGGACTCCAGTCCCATATCCAGCTATATATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGAATCCAAGTATTGTCCAGCAAAGTACAGAGATTGAAGGGAAGGGAGCTGATGGAAAAGATCGGGACTTGTCCAAAAAATTGAAAGGAACTTCTGCAAATACAGGTTCCAAAGCAGGAGAAAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATATCGCAAAGTGGAGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGAATCAGCTGCAAAAAAGAAGGGAAGCTTTGACCTGATGCTTGTTGATGGAGCCAATGCACAAAACAATTCTGCTGGTGCCATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCCCAATGCCAGCAACTAATCTTAACATCGGAATGGACTTATGGAATGCATCTTCTGGTGGTGCTGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAGATGAACGTGAGCTGAAAAGACAGAAAAGGAAACAGTCGAACCGAGAGTCAGCTAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGCTGGGAGGTGAGAATCAAACTCTCAGAGATGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCAGAAAATAATTCTATCAAGGAAGAGTTGGAGCGGTTGTGTGGTCCAGAAGCAGTTGCTAACCTTGGATGA 1014 0.4684 MGAGEESTAKSSKVSSAAQETPTALAYPDWSSSMQAYYAPGGTPPPFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPAIYPPGSIYAHPSMAVNPSIVQQSTEIEGKGADGKDRDLSKKLKGTSANTGSKAGESGKAGSGSGNDGISQSGESGSEGSSNASDENTNQQESAAKKKGSFDLMLVDGANAQNNSAGAISQSSVPGKPVVPMPATNLNIGMDLWNASSGGAEAAKMRHNQSGAPGVALGDQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGGENQTLRDELQRLSEECEKLTSENNSIKEELERLCGPEAVANLG* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0491 337 MobiDBLite consensus disorder prediction 45 69 - -
Gso2g0491 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Gso2g0491 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Gso2g0491 337 MobiDBLite consensus disorder prediction 123 175 - -
Gso2g0491 337 SUPERFAMILY Leucine zipper domain 258 314 IPR046347 GO:0003700|GO:0006355
Gso2g0491 337 MobiDBLite consensus disorder prediction 230 281 - -
Gso2g0491 337 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Gso2g0491 337 Coils Coil 268 323 - -
Gso2g0491 337 MobiDBLite consensus disorder prediction 108 122 - -
Gso2g0491 337 Pfam bZIP transcription factor 255 317 IPR004827 GO:0003700|GO:0006355
Gso2g0491 337 Gene3D - 258 312 - -
Gso2g0491 337 PANTHER G-BOX-BINDING FACTOR 1 1 336 - -
Gso2g0491 337 CDD bZIP_plant_GBF1 260 310 IPR045314 GO:0003700|GO:0006355
Gso2g0491 337 MobiDBLite consensus disorder prediction 8 22 - -
Gso2g0491 337 Pfam Disordered region downstream of MFMR 115 227 - -
Gso2g0491 337 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Gso2g0491 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 336 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso2g0491 337 MobiDBLite consensus disorder prediction 99 180 - -
Gso2g0491 337 MobiDBLite consensus disorder prediction 1 22 - -
Gso2g0491 337 MobiDBLite consensus disorder prediction 193 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0491 Gso-Chr2 5185875 5191852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0491 1 336 bZIP Transcription Factor Family AT4G36730 56.213 3.28e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso2g0491 MFMR_assoc 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0491 K09060 - gmx:778124 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0491 2 5185875 5191852 Gso16g1134 16 30223008 30229414 GST