Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0490 ATGAGAGTTCCCTCATCCCCACAAGCTAGCAACAACCATGTCCTCCACACAAACAACAACCCTAACACCTTCACCTACGAACCCACCTCGGTCCTCGACCTATGCCGGAGCCCAAGCCCCGAAAAGAAGCTCACTGTTCCCAAGCCAGAACCACAACACAACAACCAGCTAGACCTGGATGATCATGTTTTGCCTAATTCTGATTGGTGGGAGTCCATCATGAAGGACTTAACCCTACCCGAAGACTCTCCCACTCCCCTTTTGAAAACCAATCCATCATGCATCCCTGATTTCCCACCTTCTTCTCAAGACCCATCCTTTGATCACCCCACTCCTGACTTCACCTCTCTCTCCGAAATCTACAACCAAAACATCCCCTTCAATTACCCCTCCAACACTTTAGAACCTTCCTTTCATGACCTTAACCATAGCCTCCACCCCCACAACAACAACTGGGACTTCATCGAAGAGTTTATCCGCGCCGCCGATTGCTACGACAGCAGCCACTTCCAGCTGGCTCAAGCCATACTTGAGCGGCTCAACAACCGGCTTCTTCGCTCGCCCATGGGTAAGCCGCTCCACCGAGCCGCGTTTCACTTCAAAGACGCCCTTCAGTCCATTCTATCCGGTTCGAACCGGAACGGAAACGGTTCGAACCTCCTTTCCTCCATGGCGGAGATTGTTCAGACAATTAAAACGTACAAGGCCTTTTCGGGAATTTCACCCATCCCAATGTTCTCCATCTTCACCACCAATCAAGCCCTACTTGAAACCCTAAATGGATCTTCATTTGTCCACGTTATCGATTTCGAGATTGGGCTTGGAATTCAATACGCTTCTCTTATGAAAGAGATTGCTGAGAAGGCCGGTCCCGGAACCGCGCCGCTCCTTCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAGCCGCCTGGTCCGCCAGAATCTCAACCAGTTCGCGCAGGATCTAGGGATCAGCGCGCAGGTGGACTTCGTGCCGCTTCGGACCTTTGAGACGGTGTCGTTCAAGGCCGTGAGGTTCATCGACGGCGAGAAGATCGCCGTGTTGTTGTCGCCAACGATTTTCAGCCGCCTCGGAGGCAACGGAGGCAGTGTCGGCGCGTTCCTCGCCGACGTGAGGAGGATGGCTCCAGGAGTGGTGGTGTTCGTGGACGGTGAGGGGTGGACGGAGGCGGCGGCGGCGGCTTCGTTCCGGCGTGGCGTGGTGAGCAGTCTGGAGTTTTATTCCATGATGCTGGAGTCGCTGGACGCGTCAGTGGCTTCTGGGGGAGGCGGCGAGTGGGTGAGGAGGATCGAGATGCTGCTGCTGCGGCCGAAGATCTTCGCCGCGGTGGAAGGCGCACGGCGGAGGACTCCGCCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCGGATTATCAGGCAGAGTGTTTGCTTGCCAAGGTGCAAATCAGAGGCTTCCACGTGGACAAACGACATGCTGAGCTGGTGCTCTGCTGGCACGAACGAGCCATGGTTTCCACGTCAGCATGGCGGTGTTAG 1572 0.5611 MRVPSSPQASNNHVLHTNNNPNTFTYEPTSVLDLCRSPSPEKKLTVPKPEPQHNNQLDLDDHVLPNSDWWESIMKDLTLPEDSPTPLLKTNPSCIPDFPPSSQDPSFDHPTPDFTSLSEIYNQNIPFNYPSNTLEPSFHDLNHSLHPHNNNWDFIEEFIRAADCYDSSHFQLAQAILERLNNRLLRSPMGKPLHRAAFHFKDALQSILSGSNRNGNGSNLLSSMAEIVQTIKTYKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAGPGTAPLLRITAVVPEEYAVESRLVRQNLNQFAQDLGISAQVDFVPLRTFETVSFKAVRFIDGEKIAVLLSPTIFSRLGGNGGSVGAFLADVRRMAPGVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASVASGGGGEWVRRIEMLLLRPKIFAAVEGARRRTPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVSTSAWRC* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0490 523 MobiDBLite consensus disorder prediction 1 62 - -
Gso2g0490 523 ProSiteProfiles GRAS family profile. 145 522 IPR005202 -
Gso2g0490 523 PANTHER SCARECROW-LIKE PROTEIN 15 11 522 - -
Gso2g0490 523 MobiDBLite consensus disorder prediction 1 32 - -
Gso2g0490 523 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 522 IPR005202 -
Gso2g0490 523 MobiDBLite consensus disorder prediction 81 108 - -
Gso2g0490 523 Pfam GRAS domain family 156 522 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0490 Gso-Chr2 5178375 5180457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0490 57 522 GRAS Transcription Factor Family AT4G36710 53.926 3.61e-157 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso2g0490 GRAS 2.7e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0490 - - gmx:100802883 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0490 2 5178375 5180457 Gso16g1133 16 30199308 30201479 GST
Gso1g1521 1 51895737 51897781 Gso2g0490 2 5178375 5180457 PCT
Gso11g0554 11 4971250 4973272 Gso2g0490 2 5178375 5180457 PCT
Gso2g0490 2 5178375 5180457 Gso1g1521 1 51895737 51897781 PCT
Gso2g0490 2 5178375 5180457 Gso11g0554 11 4971250 4973272 PCT