Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0486 ATGGCTTCCAAACCTGTAGAAGAGATCTTCAAGGACTATAGCGCCCGAAGAATCGCTATTATCCGTGCACTCACTCATGATGTTGATAAACTTTACGGGCTCTGTGATCCAGGAAAGGAGAATTTGTGCCTCTATGGACATCCGAATAAGGCTTGGGAAGTAACTCTGCCATCAGAGGAAGTTCCACCAGAGCTCCCTGAGCCAACTCTTGGAATCAATTTTGCTAGGGATGATGTGAGTCGCAGGGATTGGATTTCTTTGGTTGCTGTGCATAGTGATTCGTGGTTGCTTTCTCTGGCCTTTTACCTTGGAATTCGTCTTAACCACAATGAAAGAAAACGCTTATTTGGTTTGATCAACATTCTTCCCACCATTTTTCAAGTTGTGACCGACAATAAACCAATTAAGGACAATCCTACTATGGATAGTGGAAGCAAATTTCGGGGAAACACCGAGCTTAAGGAGAGGCAGGTTATAGACCGAAGGTAA 489 0.4397 MASKPVEEIFKDYSARRIAIIRALTHDVDKLYGLCDPGKENLCLYGHPNKAWEVTLPSEEVPPELPEPTLGINFARDDVSRRDWISLVAVHSDSWLLSLAFYLGIRLNHNERKRLFGLINILPTIFQVVTDNKPIKDNPTMDSGSKFRGNTELKERQVIDRR* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0486 162 PANTHER ZINC FINGER, FYVE/PHD-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE, ALFIN-RELATED 4 152 - -
Gso2g0486 162 PANTHER CPG BINDING PROTEIN 4 152 IPR045104 GO:0006355|GO:0042393
Gso2g0486 162 Pfam Alfin 6 130 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0486 Gso-Chr2 5137172 5139661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0486 4 148 Alfin-like Transcription Factor Family AT5G05610 71.233 2.08e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0486 - - gsj:114369776 329.331