Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0482 ATGTCTTCCCCTCATAACTCTGCTCCTCATAATTCCTCACCCGATAACTCTACCCCTGATGATGCCACTCCCAATAACTCTGTTCCTGATAATTCCACACCAGATAACTCCATTCCTGATAATTCCACACCTGATAACTCCATTCCCGATAATTCCACACCCGATAACTCCACATCCAATAAATCCGCTCCCCATAACTCCACACCTGATAACGCCACTCCCGATAATTTCACACCCGATAATTCCAATAAATCACACAAAAGTTCCTCGGTGTCCCCTCCTTCGATGGAGGGACAAAGTACTCCAACATCAGGAAAAGATTCATCAAACAAATCATTATCAAATGAGAAATCATCGGGTTCAAACAATGATAGTAGCAATAAAGTAGCAATGGGAGCTGGGATTGGAGTAGGGTTCATTCTTCTTGTGCTAGTCATTGTGTGTTTCATTTGGAGTTGTAGGAAGAAGAAGCGAAAACAAAAGTATTATTATCCAAACCCTTCTCACGGAAAAGCGAGTAACTATTACAACAGTGGGCAACACCCTCTCCCTAGTTGGCAAGCAGGTAATTCAGGTCCTCATGGGGGTGACCATGTTATGAGGATACAACAACAACAAATGGGAATGGGAATGGGAATGGGAGGAATGGGTCCTCATAGTGGTGGATGGGGTGCACCACCACCACATATGATGAATAGTGGTGAAATGATGAGCTCAAATTACTCATTGGGAATGAGTTCTTCCTCACCAGGCCTTTCTCTTGCGCTCAATGCCAATGGTGGTACATTCACTTATGAGGAACTAGCAGCTGCCACCAAAGGATTTGCCAATGAGAACATCATAGGACAAGGTGGCTTTGGTTATGTCCATAAGGGGATTTTGCCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTTAAAGCGGGTAGTGGCCAAGGAGAGCGCGAGTTCCAAGCTGAGATCGACATCATTAGCCGTGTTCATCATCGACATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGGCAAAGAATGTTGGTCTATGAATTTGTTCCCAATTCGACTTTGGAACATCACCTTCATGGAAAGGGCATGCCTACGATGGATTGGCCTACTAGAATGAAAATTGCACTTGGATCCGCTAAAGGACTTGCCTACCTTCATGAAGATTGTAGCCCTCGCATTATCCACCGTGATATTAAAGCTTCTAATGTCCTTCTCGATCAAAGCTTCGAAGCAAAGGTCTCTGATTTTGGATTGGCTAAGTTGACCAATGATACTAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTATCTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTATTAGAACTCATAACTGGGAAACGACCTGTAGATTTGACAAATGCCATGGAGGACAGTTTGGTGGATTGGGCTCGACCACTCCTGAATAAAGGGTTGGAGGATGGAAACTTTGGAGAGTTAGTGGATCCATTTTTGGAAGGCAAATACAATCCCCAAGAAATGACAAGAATGGCAGCCTGTGCTGCTGGAAGCATTCGTCATTCTGCCAGGAAACGTTCAAAGATGAGTCAGATTGTAAGAGCACTGGAAGGAGAAGCCTCATTGGATGAATTGAAAGATGGAATGAAGCTTAAGGGGAGTGGGAATGGGAATAGCAGTGCTCCCACTTCTTCATCTGGGAGCTCAGAATATGATACAATGCAATATAATGCTGATATGATAAAGTTTAGACAGGCAATAATGTCAAGCCAAGAATTTAACGACAGCAGTGAGCTTTCCAGTAAGGAGATGGGTTATCATTAG 1857 0.4373 MSSPHNSAPHNSSPDNSTPDDATPNNSVPDNSTPDNSIPDNSTPDNSIPDNSTPDNSTSNKSAPHNSTPDNATPDNFTPDNSNKSHKSSSVSPPSMEGQSTPTSGKDSSNKSLSNEKSSGSNNDSSNKVAMGAGIGVGFILLVLVIVCFIWSCRKKKRKQKYYYPNPSHGKASNYYNSGQHPLPSWQAGNSGPHGGDHVMRIQQQQMGMGMGMGGMGPHSGGWGAPPPHMMNSGEMMSSNYSLGMSSSSPGLSLALNANGGTFTYEELAAATKGFANENIIGQGGFGYVHKGILPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPTRMKIALGSAKGLAYLHEDCSPRIIHRDIKASNVLLDQSFEAKVSDFGLAKLTNDTNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDLTNAMEDSLVDWARPLLNKGLEDGNFGELVDPFLEGKYNPQEMTRMAACAAGSIRHSARKRSKMSQIVRALEGEASLDELKDGMKLKGSGNGNSSAPTSSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSSELSSKEMGYH* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0482 618 SUPERFAMILY Protein kinase-like (PK-like) 253 547 IPR011009 -
Gso2g0482 618 Gene3D Phosphorylase Kinase; domain 1 244 350 - -
Gso2g0482 618 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524
Gso2g0482 618 SMART serkin_6 275 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0482 618 MobiDBLite consensus disorder prediction 558 582 - -
Gso2g0482 618 Pfam Protein tyrosine and serine/threonine kinase 278 477 IPR001245 GO:0004672|GO:0006468
Gso2g0482 618 PANTHER RECEPTOR-LIKE KINASE 40 617 - -
Gso2g0482 618 MobiDBLite consensus disorder prediction 1 126 - -
Gso2g0482 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Gso2g0482 618 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 40 617 - -
Gso2g0482 618 MobiDBLite consensus disorder prediction 564 582 - -
Gso2g0482 618 ProSiteProfiles Protein kinase domain profile. 275 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0482 618 Gene3D Transferase(Phosphotransferase) domain 1 351 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0482 Gso-Chr2 5084257 5089171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0482 100 609 Trihelix Transcription Factor Family AT1G70460 49.228 3.54e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gso2g0482 PK_Tyr_Ser-Thr 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0482 - - gmx:100800744 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0482 2 5084257 5089171 Gso16g1128 16 30109152 30114285 GST
Gso11g0570 11 5075020 5079300 Gso2g0482 2 5084257 5089171 PCT
Gso2g0482 2 5084257 5089171 Gso11g0570 11 5075020 5079300 PCT