Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0481 ATGTCAGACTCACACCTGATCACTTTCTGTTTTCTTTCTTGTTCCATCCTTGCTCTTATTCTCATCACCTTCATTTTCACCAGAAGAAAGAAACCAAAGTTTAATCTTCCCCCTGGCCAAATGGGGTGGCCCCTTCTTGGGGAAACCATAGGGTATTTGAACCCTTACCCTGCTGTTACACTTGGAGAATTTATGGAGAACCACATAGCAAGGTATGGTAAAATTTACAAGTCAAACTTGTTTGGGGGGCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATATTGCAGAACGATGGGAAGTTGTTTGAGATCAGCTATCCTAAGAGCATTCGTGATATACTCGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCACAAGGAAATGAGGAACATTTCACTCAACTTTCTCAGCAATGCTAAGCTCCGAACACATCTTGTCAAAGAGGTCGAGAGGCATGCCCTTCTCGTTATTAACTCATGGAACAATAATTCTACATTCTCCGCTCTACAAGAAGCCAAAAAGTTCACCTTCAATTTTATGGCGAAACGTATAATGAGCTTGGAGCCTGGGAATCCCGAAACAGGACAATTGAGGAGAGAATATGTGTCTTTCATGAAGGGTGTTGTATCTACTGCGCCTTTGAATTTGCCCGGAACAGCATACAGGAAAGCATTAAAGTCTAGGGGTGCCGTAAAGAAGATTATAGAGGGGAAAATGGAAGAAAGGAACAAGAGGATCCAAAAGGGTAACGCAAGTTTGGAGGAAGACCATGATCTTCTAAGTTGGGTTATGACGCACACAAATCTTTCAAATGAGCAAATACTTGACTTGGTATTGAGCTTGCTCTTTGCTGGCCACGAAACCTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCGGGTTGTCCTCGAGCCATACAACAATTAAGGGAAGAACACGTGGAAATAGTCACTTCAAAGAAGCAGACAGGGGAAGTTGAATTGACTTGGGATGATTACAAAAGAATGGAGTTTACTCACTGTGTTGTGAACGAAACACTTCGATTAGGAAATGTTGTGAGGTTTATTCACAGGAAGGCTATTAAGGATGTTCACTACAAAGGTTATGATATTCCATGTGGGTGGAAAGTCCTTCCGGTGGTTTCAGCTGTGCATCTCGATCCTGCACTTTTTGACCAACCTCACCAATTTAATCCTTGGAGATGGCAGGACAAGAATAAGAGTGGAAGTTGCGAAAACGCGAATGTTAACATGAACTTGATGGCGTTTGGAGGAGGACCAAGGATGTGTGCGGGATCAGAGTTAGGGAAACTTGAAATGGCTGTGTTCATCCACCATCTCATCCTCAACTACAACTGGGAACTTGTTGGAGAGGATCAACCTATTGCATACCCTTACGTTGATTTCCCCAAAGCTTTACCCATCAAAGTCCAAACACTCCTCATTTAG 1467 0.4329 MSDSHLITFCFLSCSILALILITFIFTRRKKPKFNLPPGQMGWPLLGETIGYLNPYPAVTLGEFMENHIARYGKIYKSNLFGGPAIVSADAGLNRFILQNDGKLFEISYPKSIRDILGKWSMLVLVGDMHKEMRNISLNFLSNAKLRTHLVKEVERHALLVINSWNNNSTFSALQEAKKFTFNFMAKRIMSLEPGNPETGQLRREYVSFMKGVVSTAPLNLPGTAYRKALKSRGAVKKIIEGKMEERNKRIQKGNASLEEDHDLLSWVMTHTNLSNEQILDLVLSLLFAGHETSSVAIALAIYFLPGCPRAIQQLREEHVEIVTSKKQTGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFIHRKAIKDVHYKGYDIPCGWKVLPVVSAVHLDPALFDQPHQFNPWRWQDKNKSGSCENANVNMNLMAFGGGPRMCAGSELGKLEMAVFIHHLILNYNWELVGEDQPIAYPYVDFPKALPIKVQTLLI* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0481 488 PANTHER CYTOCHROME P450 26 18 463 - -
Gso2g0481 488 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 278 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 298 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS P450 superfamily signature 289 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Gso2g0481 488 SUPERFAMILY Cytochrome P450 33 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 Pfam Cytochrome P450 37 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g0481 488 PANTHER CYTOCHROME P450 90B1 18 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0481 Gso-Chr2 5053546 5059610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0481 28 413 Cytochrome P450 AT3G50660 67.488 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0481 K09587 - gmx:100800210 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0575 11 5126698 5131648 Gso2g0481 2 5053546 5059610 PCT
Gso2g0481 2 5053546 5059610 Gso11g0575 11 5126698 5131648 PCT