Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0444 ATGTCAACGGAAGCGCCCAAGCGCGACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCCGCCGCTGGATTCGCCACCGTCGCCGTCATGCATCCCCTCGATGTTGTCCGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTAATTTTCCCAGTTACAAGAACACCGCTCACGCCGTTTTCACTATCGCTCGTTCCGAGGGATTAAGAGGGTTATATGCAGGCTTCCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGAGTTTATATTTCTTCTTCTATGACAGAGCCAAACAGAGATATGCAAGGAACAGGGAGGGGAAGTTGAGCCCAGGTCTGCATCTTGCCTCAGCAGCTGAAGCAGGAGCTATAGTTTCCTTCTTCACAAATCCAGTATGGCTGGTAAAGACAAGATTGCAGCTTCAAACTCCTCTTCATCAGACACGACCATACTCTGGGGTTTATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGAATTGTTCCTGGTCTATTTCTGGTCTCTCATGGTGCTATTCAGTTTACAGCATATGAGGAGCTACGCAAAGTTATTGTTGATTTTAAGAGTAAGGGAAGTACAGTAGATAATCAAAACCCTGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCAGTACTTCTAACCTATCCATTTCAGGTTATACGGGCTCGATTGCAGCAAAGACCCAGTGGTGATGGGGTTCCAAGATATATGGACACTTTGCATGTTGTGAAAGAAACTGCACGATTTGAAAGTGTCCGAGGTTTTTACAAAGGAATTACCGCAAACCTCTTGAAGAATGCTCCCGCTTCTTCGATAACATTTATTGTTTATGAAAATGTCCTAAAATTGCTTAAACCGGCTAGAAGGAATGACTGA 945 0.4508 MSTEAPKRDQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSNFPSYKNTAHAVFTIARSEGLRGLYAGFLPGVLGSTISWSLYFFFYDRAKQRYARNREGKLSPGLHLASAAEAGAIVSFFTNPVWLVKTRLQLQTPLHQTRPYSGVYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKVIVDFKSKGSTVDNQNPDKLLNSVDYAVLGATSKLAAVLLTYPFQVIRARLQQRPSGDGVPRYMDTLHVVKETARFESVRGFYKGITANLLKNAPASSITFIVYENVLKLLKPARRND* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0444 314 Gene3D Mitochondrial carrier domain 13 307 IPR023395 -
Gso2g0444 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Gso2g0444 314 PANTHER BNAA09G07970D PROTEIN 10 308 - -
Gso2g0444 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Gso2g0444 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Gso2g0444 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Gso2g0444 314 SUPERFAMILY Mitochondrial carrier 12 302 IPR023395 -
Gso2g0444 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Gso2g0444 314 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Gso2g0444 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0444 Gso-Chr2 4704253 4714734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0444 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 38.489 7.43e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0444 K15115 - gmx:100790192 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0444 2 4704253 4714734 Gso16g1071 16 29171302 29177174 GST