Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0436 ATGGATATTGGTGGTGGAGTGGAAGAGCCAGTGAGAGAGTTGAGGCAATACTTCAAAACTGGAAAAACCAAGAGTGTAACATGGAGGAAAAACCAGCTCACATCTCTCATAGACCTTGTTCATGAGAATGAAGATGCTATATTTAAGGCCCTCCATAAAGATCTTGGGAAGCACCCTGTTGAGGCTTACCGTGATGAGGTTGGAGGGGTAGAAAAATCAGCCAGCAAAGCTTTGAGCTGCGTTGAGAAATGGATGGCCCCTAAAAAGAGTGATATCCCTTTTCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATAATTTCTTCTTGGAACTTCCCAATCATACTGGCATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAGTCATTAAACCTTCAGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCCAATACCATTCCTCGCTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGTGGAGAAGATGTCTGTGAACAATTACTGCGACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAGCGTAGTGATGTCTGCTGCTGCAAAGAATTTAACTCCTGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATACTGGATTCCCTTCCCAATCCTTCAGAGTTTGAGTTGGCAGTGAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGTCAAGCTTGCATAGGAATAGACTATTTGCTTGTTGAGGAGAAGTTCTCATCTGCTGTGATAAAACTATTAAAGAAGTTCATAAGAAGATTTTATGGTGAAAACCCAGTGGAGTCAAAGGTAATTTCAAGAATAATAAACAAGCAGCACTTTGAGAGATTATGCAATCTTCTCAAAGACCCTCTTGTTGCGGCTTCCATCGTTCATGGTGGTTCAGTCGACGAAGAAAACTTGTTCATTGAGCCTACAATTTTGTTAGATCCTCCACTAGATTCTGAGATAATGGCAGAAGAGATATTCGGCCCACTGCTTCCTATAATCACATTGGATAAAATTCAGGAAAGTATTGAGTTTATCAATGCAAAGCCAAAACCTCTTGCCATTTATGCCTTCACCAAAGATGAAACTTTCAAGAGAAAGATTCTATCAGAAACATCCTCAGGAAGTGTCGTATTTAATGACACAATGGTTCAATTTTTATGTGATACGCTGCCATTTGGAGGAGTTGGCCAGAGTGGTTTGGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAAGCTGTAATGCATAGAAAGCTGTTCCTTGAAATTGAGCCAAGGTACCCTCCTTGGAATAAGTTCAAGCTAGAGTTTATCAGATTAGCATACAGGCTGAACTACTTTGGACTAGTACTGCACATGCTGGGCTTGAAAAGATACAACTAG 1458 0.417 MDIGGGVEEPVRELRQYFKTGKTKSVTWRKNQLTSLIDLVHENEDAIFKALHKDLGKHPVEAYRDEVGGVEKSASKALSCVEKWMAPKKSDIPFLFFPAKGEVLSEPLGVVLIISSWNFPIILALDPIIGAISAGNVVVIKPSEQAPACSSFLANTIPRYLDSNAIKVIEGGEDVCEQLLRQKWDKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPSEFELAVKRIVGGKWGPCSGQACIGIDYLLVEEKFSSAVIKLLKKFIRRFYGENPVESKVISRIINKQHFERLCNLLKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSEIMAEEIFGPLLPIITLDKIQESIEFINAKPKPLAIYAFTKDETFKRKILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGLGRYHGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWNKFKLEFIRLAYRLNYFGLVLHMLGLKRYN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0436 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Gso2g0436 485 Pfam Aldehyde dehydrogenase family 9 439 IPR015590 GO:0016491
Gso2g0436 485 PANTHER ALDEHYDE DEHYDROGENASE 9 483 IPR012394 GO:0006081
Gso2g0436 485 SUPERFAMILY ALDH-like 7 454 IPR016161 GO:0016491
Gso2g0436 485 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 9 483 - -
Gso2g0436 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Gso2g0436 485 PIRSF ALDH 5 480 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0436 Gso-Chr2 4576334 4581301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0436 7 483 Aldehyde Dehydrogenase Gene Family AT4G36250 62.893 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0436 K00128 - gmx:100809812 972.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0436 2 4576334 4581301 Gso16g1064 16 28921450 28925507 GST