Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0426 ATGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTGGGTTACTATCTGAGGAAGAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAAAGAGATCGACCTATATCGTATTGAACCATGGGATCTACAAGAGATATGCAGGATTGGGTACGAGGAGCAGAATGAGTGGTATTTCTTTAGCCACAAAGATAAGAAATATCCAACTGGGACAAGAACCAACAGAGCCACCATGGCAGGGTTTTGGAAGGCGACAGGAAGAGACAAATCGGTGTATGAAAGCATCAAACTTATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAACTGATTGGATCATGCACGAGTATAGGCTTGAAACCGTTGAGAATGGACCTCCACAGGAGGAAGGATGGGTGGTATGCAGAGCATTCAAGAAAAGAACAACAAACGGCCAAACAAAGACTATTGAACGATGGGATCGAAACTACTTATACGATGAACAAGCATGTGGTAGTGTCAGCAGCACTGTGGTGGACCATAATATTGACCTTATGGTAAGGCAACAACAACCTCAGAGGTTTTCAGCAGCTCAAAATTTCCTGTACAAGCAAGAAGAGATCATAGAAGAAGGTAATAATAATTTGAGCTTCATGCATGCAGAACAACATTTGGTGCAGCTTCCTCAGCTAGAAAGTCCTTCTTTGCCACTAGCAAAGAAGCAAAGCTCAGTAATGTCCCTAATAGCAGAGAATATTATTAATAACGAAGATATTGATAATATTTCTCAAAAGGGTTTATCCCACAACACTGCAAAGAAAGTGACTACTGATTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCATGAAGAGAGGCATGAATTAATAGGTGTGTCAAGCTTTGCAACTCATCACACTACTACTAGCTCGGACATGGCATTGTTGCTACTGCAGAATAATAGTAGGGAAAATGAAAGGAATTACAAGTTCAACCCGTTTTTGAATACAAGCTCAACATCAGACTGTGACATTGGGATATGCGTATTTGAAAAATGA 1089 0.4151 MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEIDLYRIEPWDLQEICRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYESIKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQEEGWVVCRAFKKRTTNGQTKTIERWDRNYLYDEQACGSVSSTVVDHNIDLMVRQQQPQRFSAAQNFLYKQEEIIEEGNNNLSFMHAEQHLVQLPQLESPSLPLAKKQSSVMSLIAENIINNEDIDNISQKGLSHNTAKKVTTDWRALDKFVASQLSHEERHELIGVSSFATHHTTTSSDMALLLLQNNSRENERNYKFNPFLNTSSTSDCDIGICVFEK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0426 362 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Gso2g0426 362 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 337 - -
Gso2g0426 362 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Gso2g0426 362 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Gso2g0426 362 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 337 - -
Gso2g0426 362 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0426 Gso-Chr2 4460912 4464707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0426 2 361 NAC Transcription Factor Family AT2G18060 58.575 1.27e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso2g0426 NAM 1.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0426 - - gmx:100797578 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0426 2 4460912 4464707 Gso16g1049 16 28568179 28572154 GST
Gso11g0636 11 5689965 5694837 Gso2g0426 2 4460912 4464707 PCT
Gso2g0426 2 4460912 4464707 Gso11g0636 11 5689965 5694837 PCT