Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0419 ATGGCCATCAAAAAATCCAATAAGCTACCCCAAGCAGATGTGATAAAGCAAATTGTGAGAAGGTGTTCAAGCTTTGGGAAGAAGCAGCAACAGGGCTACAATGAAGAGGGTGGTCTTCCAGAAGATGTGCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATACATTGTCCCAATTTCATGGTTGGCTCATCCACAATTTCAAAGCTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACAATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 324 0.4259 MAIKKSNKLPQADVIKQIVRRCSSFGKKQQQGYNEEGGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0419 107 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
Gso2g0419 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 107 - -
Gso2g0419 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0419 Gso-Chr2 4402277 4403008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0419 40 106 Calmodulin-binding Proteins AT3G43120 50.746 1.14e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0419 K14488 - gmx:100527235 222.631