Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0410 ATGGAGGTGGAGGTGCCAATCTCGCTTGATTCGAATAATCAACTTCAGCCAGAGACTGTAGTTTCAGTTCAAATTGGGGATCCTGGTGTTTCCTTATCTGTTGCAAATGCTGTTAACCCGCAGCAACAAGCTACAAAAAAACCGACCAGGCAGTGGGCTGCGTGGACTCGACAAGAGGAGGAAAGTTTCTTCACCGCGTTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGACTTGTGAGACGGATGAACAAACTTCTTGGTCCAGGATTATGTTTGGATGCCAAAAACTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGGAGATTTAAAATTTTTTTAGAAGCCTTGGAACACCAATTATTGAAGGACCGGAAGAAGAATGTGAGGAAGCGACCCTTACAGGGGGGGAATTGTCTTCCTTCTGCGCCTACCACAGTCTCAAATCAAAGTAGAGCATCAGGAAATGATGCCTATGCAGTTAAACTGGTACTTGTTGACAGTCAAAATATTTTAAAATTGGGACCTTCTAAACCATCAACGAAGCGCAATGTAAACATGGGTGTTAACCGTAGTAACACTAAGGGAGATTCAAATACCATGAAACCAACAAGGCAACGAAAGAAATCTGGTACGATTTCAACGGCTGCTTATAGAAAATGGGAGAAGGCTGCAATTGCTGGTGTTTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCAACTGTTAAAGGAATTGAACAAGACCAGGAGAATCCAGGAGAAAAATGTTCTGATCCCGCTGATTATGTCCTGCCCTCTTTACCCACATGTCCACAAAATCAATTTGTTGATAACAATGTGAACAATATTATGAAACTTAAGCTCCAGTTATTTCCAATTGATGAACCTACTCGAAGAGCATTGGAAATGGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCATCAATTTTAGAACATCTAAACCGTAAATGGGGTAATTCAAGCATAGCAGCTGGAGAAGTAATGCTTTTTCCTTATGGTATTCAAAGGGAAAACTTGGTTAATTGTCCGAGATGGACCCAGGAATCTACTCTTAGTGCAGCAGATATATATGCAATGATTGGAAGTCCACCCATCTTCCGTTTAAGGTATGGCTGGTTCTCCAATACTGAGCTTGGGTTATTAAATATGCAAGTGCCTGTAGCATCTGGCTCCATGCTCAGACAATACAAAAGTACTGTGGACAATGCTAAGGATCAGATTGTGAATTCAGTTTCATTTCCTACACCATTGACTAATACTCATTCCATGGAGCTCTCTGAAGATTGCAGAACATCCATGAACAGAAACCGTACTCTTATCACTGCTTCAACTGAGGAATCTCGTGATCCTACAGCCAATACACTGTGGCATGGAAAAGATGTTAGGGATGGAGCTGTGTCTACACAGTTGGAAGACATGGATGAGTTGAAAATAAGCAGTGGAGCAGGACTGTCAGCTGGAGAGTGGGCTGATAGCCTTACCAACATTAGTGTGGGGGATCTACTTTCAGGAGTGTCCCAGGATCTTGATAACTGCATCGATCCTCCTATTGCAGAGAATTTTCATGATATTCAGCAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGACAGGATGGGACAATCATCTCTGGCATCCCATATGTCTTCCATCTGGGATGCCGAAGAAACTTGTGATGCCTTTTTATTTAAAAAAGATCCTATTCTTCACGAAGATCATCCTCGTTTATCTCCAGTTGCTTCTTTAGAGTCTGAGAAAAAGGTTACCAAAAGAAGCTTTGACAAATTGGACGAGCTGTCACCTGAAAGAGAGAGGCTTGTGGATGATTGTGCTCAAACAGACCCTAATCCTATGGACAGTTCCGAGTCTGATGCAGATATCCAGGAGCATTTAGGAAAGGATTTTAGTGCGCTAGCAGATATGTATTGGCCTGATTCCTTGGGACCTTTGGATTTGGATATATCATCATCAACTAAATACCATAGCGAAGATCTAATTTTTAGTGATAGTCTTAGTGGATTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGTTCCTTTTTTGGGTTTGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCCGCCCTTTCAGATTTTAAAATTGGAAGTGGTATCTGA 2349 0.4189 MEVEVPISLDSNNQLQPETVVSVQIGDPGVSLSVANAVNPQQQATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPSAPTTVSNQSRASGNDAYAVKLVLVDSQNILKLGPSKPSTKRNVNMGVNRSNTKGDSNTMKPTRQRKKSGTISTAAYRKWEKAAIAGVSLVADAAEHLERAATVKGIEQDQENPGEKCSDPADYVLPSLPTCPQNQFVDNNVNNIMKLKLQLFPIDEPTRRALEMDKHNPHLELTLSTRKKISSILEHLNRKWGNSSIAAGEVMLFPYGIQRENLVNCPRWTQESTLSAADIYAMIGSPPIFRLRYGWFSNTELGLLNMQVPVASGSMLRQYKSTVDNAKDQIVNSVSFPTPLTNTHSMELSEDCRTSMNRNRTLITASTEESRDPTANTLWHGKDVRDGAVSTQLEDMDELKISSGAGLSAGEWADSLTNISVGDLLSGVSQDLDNCIDPPIAENFHDIQQIPFSSDSFDAAIAAHISRHQDRMGQSSLASHMSSIWDAEETCDAFLFKKDPILHEDHPRLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPNPMDSSESDADIQEHLGKDFSALADMYWPDSLGPLDLDISSSTKYHSEDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKEAPSTVEARESAALSDFKIGSGI* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0410 782 Gene3D - 16 104 - -
Gso2g0410 782 MobiDBLite consensus disorder prediction 163 188 - -
Gso2g0410 782 MobiDBLite consensus disorder prediction 211 248 - -
Gso2g0410 782 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
Gso2g0410 782 SUPERFAMILY Homeodomain-like 46 101 IPR009057 -
Gso2g0410 782 PANTHER CRAMPED PROTEIN 29 758 - -
Gso2g0410 782 PANTHER PROTEIN CRAMPED-LIKE 29 758 - -
Gso2g0410 782 SMART sant 51 99 IPR001005 -
Gso2g0410 782 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Gso2g0410 782 CDD SANT 54 97 IPR001005 -
Gso2g0410 782 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0410 Gso-Chr2 4334929 4340831 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso2g0410 Myb_DNA-binding 5.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0410 - - gmx:100780579 1561.58