Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0408 ATGGCTTCGAGCGCGACGCTCTACCAGATTCTGGGAGTCCGCGCCGTCGCATCCGGCGAGGAAATCAAGGCGGCGTACCGGCGGCTGGCGAGGGTTTGCCACCCTGACGTGGTGCCGTTGGAGCGAAGGGATTCCTCTGCGGCAGAGTTTATGAAGATCCACGCCGCATACCGCACGCTATCGGATCCTGAGAAGCGGGCCAGTTATGATAGAAGCTTGTTCCGGCGGCGCCAGCGGACGCTAACAATGTCTCCGTCGGGGTATTGTGGCTATGGTGGTCGGAACTGGGAAACGGACCAATGTTGGTAG 309 0.6052 MASSATLYQILGVRAVASGEEIKAAYRRLARVCHPDVVPLERRDSSAAEFMKIHAAYRTLSDPEKRASYDRSLFRRRQRTLTMSPSGYCGYGGRNWETDQCW* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0408 102 SMART dnaj_3 5 65 IPR001623 -
Gso2g0408 102 Gene3D DnaJ domain 1 86 IPR036869 -
Gso2g0408 102 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 102 - -
Gso2g0408 102 Pfam DnaJ domain 7 70 IPR001623 -
Gso2g0408 102 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 1 102 - -
Gso2g0408 102 CDD DnaJ 6 62 IPR001623 -
Gso2g0408 102 SUPERFAMILY Chaperone J-domain 3 90 IPR036869 -
Gso2g0408 102 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gso2g0408 102 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gso2g0408 102 PRINTS DnaJ domain signature 45 65 IPR001623 -
Gso2g0408 102 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0408 Gso-Chr2 4324912 4325835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0408 8 70 C2H2 Transcription Factor Family AT1G74250 42.424 1.22e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0408 - - gmx:100779511 211.46