Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0399 ATGGGTTCTATTGGAATTGAGAGCTCGGGACCTGAGGTTGTCACCGTTGATGTACATGCAACCAAGGATCTGATCCAGACCAGTCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATGCAGAGAAGATCATTAACGTTGCATACATGTTTAATACACCAGAAGGCAGAGTGAAGAATCCAGAATTTCTTAAGGAGGTTTCATATGCTTGCAAGAAAGAAGATCATATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTCTGTATGCAACTGCTGATCTTCTAACGGAAGGATTTAAGGATGTGAGCAACATGGGAGGAGGTTATCTGGACTGGGTTAAAAATGAATTGCCAGTGAAAGCACCTTTGGACTCGGTTAAAATCGAATTGCAAGTGAAGAAAGAACCTTTGGACTTGGTTAAAAATGAATTGCCAGTGAATGCACCTATAGTCGGTTAA 477 0.4235 MGSIGIESSGPEVVTVDVHATKDLIQTSHVYLDVRTVEEFQKGHVDAEKIINVAYMFNTPEGRVKNPEFLKEVSYACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYLDWVKNELPVKAPLDSVKIELQVKKEPLDLVKNELPVNAPIVG* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0399 158 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 IPR044684 GO:0003824
Gso2g0399 158 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 - -
Gso2g0399 158 CDD RHOD 20 119 - -
Gso2g0399 158 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Gso2g0399 158 SMART rhod_4 16 124 IPR001763 -
Gso2g0399 158 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Gso2g0399 158 Pfam Rhodanese-like domain 22 120 IPR001763 -
Gso2g0399 158 Gene3D - 7 127 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0399 Gso-Chr2 4245513 4247522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0399 3 125 Sulfurtransferasese or Rhodanese AT5G66170 54.472 4.00e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0399 - K15692 gmx:100305809 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0399 2 4245513 4247522 Gso16g1010 16 27811380 27813290 GST
Gso1g1417 1 50798308 50800089 Gso2g0399 2 4245513 4247522 PCT
Gso11g0657 11 5908204 5909851 Gso2g0399 2 4245513 4247522 PCT
Gso1g1382 1 50480012 50482452 Gso2g0399 2 4245513 4247522 PCT
Gso2g0399 2 4245513 4247522 Gso1g1417 1 50798308 50800089 PCT
Gso2g0399 2 4245513 4247522 Gso11g0657 11 5908204 5909851 PCT