Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0390 ATGGATTTACTCTGTCAAAAGCTCCTTTCTCAATGGCTTTTAGTCATTCTCTGGTGTTCTATCATAGCCACCATCTTTCAACATGTTTCTGTTGTGAGCCTACCAAACAATGAAACAGTGCCAGCAGTGGTTGTATTTGGGGACTCTATAGTAGATACAGGAAACAACGACTATATCACCACACTTGTCAAATGCAATTTCCAACCATATGGTAGAGATTTTGGTGGAGGAAATCAACCAACTGGAAGGTTCAGCAATGGCTTAGTTCCATCAGACATAATTGCTGCAAAATTTGGAGTCAAGAAATTTTTACCTCCTTATCTTGACCCAAATTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCGGGTGGTGCCGGATTTGATCCTCTAACAGCTGAATTAGTGAATGTGATGTCATTGTCAGATCAATTGGACATGTTCAGGGAGTACACAAGGAAGATAAATGAAGCGGTTGGAAGAAACAGAACGGCAATGATAGTGTCTAAGAGCATATACATAGTGTGCGTAGGAAGTGATGACATTGCCAACACTTATTCTCAATTACCATTTAGGAGTGCTGAGTATGATATTCCTTCGTACACTGACTTAATGGCTTCAGAAGCCTCAAACTTCTTGCAGAAACTTTATGGCCTAGGAGCTAGAAGGATTGGAGTATTTGGTTTACCAGTCATAGGGTGTGTGCCTTCACAAAGAACACTTGGTGGAAGCTTGAATAGAGCCTGCTTAGATTCTTCTAACCAAGCAGCAATGCTCTTCAACTCGAAGCTCTCCACCCAAATGGTTGTGCTAGGAAAAAAGTTTTCAGACTCTAGGCTTGTTTATCTTGATTCTTACAACGGATTGCTTAACATGCTTCAAAATCCTGCTAAATATGGTTTTGAAGTGACAGATAGAGGGTGCTGTGGCACGGGGAATATAGAAGTGAGCCTTTTGTGCAACCGTTACAGCATAGACACATGCTCTAACTCCTCTAACTACATATTCTGGGACAGTTATCATCCCACACAGAAGGCTTACAATGTCCTTAGTTCTTTAGTGCTTGATAACAAAATTAAGGACTTCTTCTGA 1098 0.4098 MDLLCQKLLSQWLLVILWCSIIATIFQHVSVVSLPNNETVPAVVVFGDSIVDTGNNDYITTLVKCNFQPYGRDFGGGNQPTGRFSNGLVPSDIIAAKFGVKKFLPPYLDPNLQLQDLLTGVSFASGGAGFDPLTAELVNVMSLSDQLDMFREYTRKINEAVGRNRTAMIVSKSIYIVCVGSDDIANTYSQLPFRSAEYDIPSYTDLMASEASNFLQKLYGLGARRIGVFGLPVIGCVPSQRTLGGSLNRACLDSSNQAAMLFNSKLSTQMVVLGKKFSDSRLVYLDSYNGLLNMLQNPAKYGFEVTDRGCCGTGNIEVSLLCNRYSIDTCSNSSNYIFWDSYHPTQKAYNVLSSLVLDNKIKDFF* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0390 365 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
Gso2g0390 365 PANTHER GDSL ESTERASE/LIPASE EXL3 2 364 - -
Gso2g0390 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 364 - -
Gso2g0390 365 Gene3D SGNH hydrolase 29 361 IPR036514 -
Gso2g0390 365 CDD SGNH_plant_lipase_like 41 359 IPR035669 -
Gso2g0390 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0390 Gso-Chr2 4154215 4156977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0390 20 360 Pollen Coat Proteome AT1G75910 37.391 5.15e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0390 - - gmx:102668883 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0390 2 4154215 4156977 Gso16g0990 16 27403355 27405864 GST
Gso11g0674 11 6010148 6012981 Gso2g0390 2 4154215 4156977 PCT
Gso2g0390 2 4154215 4156977 Gso11g0674 11 6010148 6012981 PCT