Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0378 ATGAAAAATAGGAGTGGATCTGCACATAAGATGTTACTGGAATTTATTGCTGGCATTTTAACAACAATGGTTGGGGCCTTACTCTATTGCCTCTTCTGGAGAAAGGTCATTCCATTTCTTAAGCAACGAAAGACTTTGAAAGGAAAGGAACATGATAAAATATCATTAAGGTATTTTGATTTTAAGGAACTAGAGAGAGCAACCAAAAATTTTAGCCAAGATTGCTTGCTAGGTTCTGGTGCATTTGGAAATGTCTACAAAGGAACCTTTGACTTAGAAGGAACACTAGCCATTAAGAGAGCTCATTCTGAATCATTCTCAAGTGTGGAAGAATTCAGAAATGAAGTTAGGCTCCTCTCAGCTGTAAGGCACAGGAATCTTATTGGTTTGATTGGATATTGTGAAGAACCAGAACGACATGGAGCCAAAATCCTAGTCTATGAATATGTTCCAAACGGTTCACTGCTTGAGTACATCATGGGAAACGAAACGAGCTTAACTTGGAAGCAAAGACTAAACATAGCAATAGGAGCAGCAAGAGGCATAGCTTATTTGCATGAAGGGGTGAAACCAAGCATTATTCACCGTGACATCAAACCAAGTAACATCCTATTAGCGGAAGGTTTTGAGGCTAAGGTCTCAGATTTTGGGCTAGTAAGATCAGGGCCAACTGGTGATCAGTCACATGTCAGCAGCCAGATTAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTTAAGCTTTCATTTGACCAAATTCAGCGACGTCTATAGCTTCGGTATCATACTTTTGCAACTTGTTTCAGCTAGACCTGTGGTGGATTCCACTGTAAACCAAAGTAATCAACATATTATTGACTGGGCAAGGCCAAGCTTAGAGAAGTGTAGTGTTGAAGAAATCATAGATGCAAATCTACTATGTCAAAGTGAGCCATGCAACATGGAAGTTATGCTAAAGATGGGGCAACTTGGTTTAAGATGTGTGGTTGAAGAACCAAAACATCGCCCAACAATGAGCCAGGTGTGTCAAGAACTAGAGCAAGCCCTCTACTCAGCTAATGATAGCTTCAATAACAAGAAATCTTCAAAGGGATTCCTTACACCAATTGGCTCATCCCAACAATCAACAAAGTCGGAGACTCGGCGATCAGTTGAATCATACGATTGTTCACAAAGCTTTGTTAGTATTGACAGTGTTGGATTACAGAAATTTCATGTTGATATGGATAGTTTCTCCTTTAAGAGCACAGACTTAAGGTGCTTAGAAAATAATAGTATTAGTATTGACATGGATAGAGTATAA 1305 0.3969 MKNRSGSAHKMLLEFIAGILTTMVGALLYCLFWRKVIPFLKQRKTLKGKEHDKISLRYFDFKELERATKNFSQDCLLGSGAFGNVYKGTFDLEGTLAIKRAHSESFSSVEEFRNEVRLLSAVRHRNLIGLIGYCEEPERHGAKILVYEYVPNGSLLEYIMGNETSLTWKQRLNIAIGAARGIAYLHEGVKPSIIHRDIKPSNILLAEGFEAKVSDFGLVRSGPTGDQSHVSSQIKGTPGYLDPAYCLSFHLTKFSDVYSFGIILLQLVSARPVVDSTVNQSNQHIIDWARPSLEKCSVEEIIDANLLCQSEPCNMEVMLKMGQLGLRCVVEEPKHRPTMSQVCQELEQALYSANDSFNNKKSSKGFLTPIGSSQQSTKSETRRSVESYDCSQSFVSIDSVGLQKFHVDMDSFSFKSTDLRCLENNSISIDMDRV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0378 434 ProSiteProfiles Protein kinase domain profile. 71 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0378 434 CDD STKc_IRAK 77 348 - -
Gso2g0378 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gso2g0378 434 MobiDBLite consensus disorder prediction 362 384 - -
Gso2g0378 434 SMART serkin_6 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0378 434 SUPERFAMILY Protein kinase-like (PK-like) 56 357 IPR011009 -
Gso2g0378 434 PANTHER OS01G0750732 PROTEIN 16 394 - -
Gso2g0378 434 Pfam Protein tyrosine and serine/threonine kinase 76 346 IPR001245 GO:0004672|GO:0006468
Gso2g0378 434 Gene3D Phosphorylase Kinase; domain 1 41 149 - -
Gso2g0378 434 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Gso2g0378 434 Gene3D Transferase(Phosphotransferase) domain 1 150 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0378 Gso-Chr2 4053376 4057261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0378 57 384 Receptor kinase-like Gene Family AT1G30570 41.691 2.83e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso2g0378 PK_Tyr_Ser-Thr 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0378 - - gmx:100817470 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0378 2 4053376 4057261 Gso16g0977 16 27130229 27133413 GST