Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0364 ATGATCCTTCGAATAGTTCAACCGCTCTCCTTCAACATAACTAACTTTAGCAACCCTGAAAGCGCAAGCCGCATCCAATACACAGGCGTAGCCAAAATTGAGAACGGATCCATAGTTCTCAATCCACTCATCAACAATGGAGTTGGACGAGCCATCTATGGCCAACCTTTGCGCTTGAAAAACTCTTCTAAAGGAAATGTCACTGACTTTTCTACTCGTTTTTCATTCACAATTGATGCGCGGAATAAAACCAACTATGGTGATGGCCTTGCTTTCTACATGGCACCACTTGCCTTTGACTATCAGACTCCACCCAATTCATCTGACGGTTTCCGTCTCGGCTTATACGGTGGCAGCCAAGATAACATCGTTGCTGTCGAATTCGACACTTGCGTAAACGAGTTTGACCCACCCATGCAGCACGTAGGGATCAACAATAACTCTGTTGCATCCCTCGAATATAAGAAGTTTGATATTGAGAGCAACATAGGGAAAATGGGGCATGCGTTGATAACTTACAATGCTTCTGCCAAACTCCTTGCTGTCTCGTGGTTCTTTGAGGGAACAAGTTCTGGTTTTACGCCTAATGATTCTCTCTCACACCAGATTGACCTCATGGAAATTCTACCAAAGTGGGTCACTGTTGGGTTTTCGGGAGCAACCGGGTCATCCAAAGAGGAAAATGTTATCCATTCCTGGGAATTCAGTCCAAATCTAGATCTAAATTCCACTAATCAAGAGGCAAACAATGAGAATTTCATCATAATTACCAAATACAAGGTTCAGGTCAAAGTAGTAGTTGTTGCAGTGATATGTTCTAATATTGTTGTGCTCGTGGTTATTAGTATAATTACTTGGTTGATTATCAAGAAGAGAAGAACCGAGGATGGTTTTGATTTGGATAAATTAGCGTTTATGCCTAGAAGGTTTGGTTATAAGGAATTAGTTGCAGCCACGAACGGGTTTGCAGATGATAGAAGGCTCGGAGAAGGAGGCTATGGACAAGTCTACAAAGGGTTTCTGAGTGATTTAGGGCGGGTGGTTGCGGTGAAAAGGATTTTTTCTGATGTTGAAGACTCCGAGGAAATATTTGCAAACGAGGTGAAGATTATAAGTCGTCTTATACATAGAAACCTTGTGCAATTCATAGGGTGGTGCCACGAGCGAGGGGAGTCATTGCTGGTTTTCGAGTACATGACTAATGGAAGTCTTGACACTCATATTTTCGGCGACAACAGCAGAAGAACTTTGACATGGGGAGTGAGATACAAGATAGCGTTAGGTGTGGCTAGGGCACTTCGTTATCTTCACGAAGATGCGGAGCAGTGTGTTCTTCATAGGGATATAAAGTCAGCTAATGTTTTGTTAGACGCAGATTTCAATACTAAGATTAGTGACTTTGGGATAGCGAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAGGGTGGTGGGGACATATGGGTACCTGGCTCCGGAATATATAAACCAAGGAAGGGTTAGTAAGGAATCTGACATGTACGGTTTTGGGGTGGTTGTGTTGGAGATAGCAAGTGGAAGGAAGACTTATAACCATGATGTGCCTTTGGTGAATAGGGTATGGAAACATTATGTGGAAGGGAATATTTTGAATGTTGCTGATAAGGATTTGAAGATGGATTTTGATGCCGTTGAAATGACATGCTTGCTCACTGTAGGACTATGGTGTACCCTCCAAGACCACAAGAAAAGGCCAAAGGCAGAACAAGTTATTAATGTTCTTAAGCAAGAAGTGCCATTGCCAAATATAGATCGTGTTTGA 1803 0.426 MILRIVQPLSFNITNFSNPESASRIQYTGVAKIENGSIVLNPLINNGVGRAIYGQPLRLKNSSKGNVTDFSTRFSFTIDARNKTNYGDGLAFYMAPLAFDYQTPPNSSDGFRLGLYGGSQDNIVAVEFDTCVNEFDPPMQHVGINNNSVASLEYKKFDIESNIGKMGHALITYNASAKLLAVSWFFEGTSSGFTPNDSLSHQIDLMEILPKWVTVGFSGATGSSKEENVIHSWEFSPNLDLNSTNQEANNENFIIITKYKVQVKVVVVAVICSNIVVLVVISIITWLIIKKRRTEDGFDLDKLAFMPRRFGYKELVAATNGFADDRRLGEGGYGQVYKGFLSDLGRVVAVKRIFSDVEDSEEIFANEVKIISRLIHRNLVQFIGWCHERGESLLVFEYMTNGSLDTHIFGDNSRRTLTWGVRYKIALGVARALRYLHEDAEQCVLHRDIKSANVLLDADFNTKISDFGIAKLVDPRLRTQKTRVVGTYGYLAPEYINQGRVSKESDMYGFGVVVLEIASGRKTYNHDVPLVNRVWKHYVEGNILNVADKDLKMDFDAVEMTCLLTVGLWCTLQDHKKRPKAEQVINVLKQEVPLPNIDRV* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0364 600 Gene3D Phosphorylase Kinase; domain 1 307 398 - -
Gso2g0364 600 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Gso2g0364 600 Gene3D Transferase(Phosphotransferase) domain 1 399 599 - -
Gso2g0364 600 ProSiteProfiles Protein kinase domain profile. 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0364 600 CDD lectin_legume_LecRK_Arcelin_ConA 9 239 IPR001220 GO:0030246
Gso2g0364 600 Gene3D - 7 264 - -
Gso2g0364 600 SMART serkin_6 322 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0364 600 ProSitePatterns Legume lectins beta-chain signature. 124 130 IPR019825 -
Gso2g0364 600 SUPERFAMILY Protein kinase-like (PK-like) 305 588 IPR011009 -
Gso2g0364 600 Pfam Protein kinase domain 323 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g0364 600 PANTHER LECTIN RECEPTOR KINASE 8 597 - -
Gso2g0364 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Gso2g0364 600 PANTHER - 8 597 - -
Gso2g0364 600 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 245 IPR013320 -
Gso2g0364 600 Pfam Legume lectin domain 9 247 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0364 Gso-Chr2 3943681 3945584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0364 1 597 Receptor kinase-like Gene Family AT5G10530 43.450 2.12e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso2g0364 Pkinase 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0364 - - gmx:100813751 1145.57