Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0355 ATGAGTCGGAATAAAAAAGGGTTAAAACTCAAAAGGACAAGCTGTGGCATATCCATGACCACTGAAAATGGCACTTTTGGTTGCATGTACCTTCCTTCATCCCCCCCTTTTCCATTGTTCATTATAAATAATTGCTGCACTTTGTTTCTAACAGCAAACACAACTCCACCACTATTATACAACTATAATAATAACGGCTGCATAGATAGCACACTTTCATTTTTCTCTTATCTCCTTTTCTCTTCTATAACTATGTCTCATCTGAGCCACAAGACCTTGGTTTATCTTCCTGAAATGAGGCCTGAACATGAAGCTGAGGAAGGCCAAGCCAATAGTCTTAGTTCCATTTCTTCTTGGCCTCATCGTTTGGAGAATGTTTTCCCTGTTTATGCCATGGGAACTTCCAACCCTGTCTTGAATTCTTCACTTCACATTTCGGATTGTCTTGATCCTATTTGGGATGTTGTCAGAGAAGAAGCCAAGTTAGAGGCAGAAAAGGAGCCAATATTAAGCAGCTTCTTCCATGCCACTATTCTATCTCATGATTGCTTGGAGGAAGCATTGGCTTTTGCTCTTGCCAACCGTCTCCAAAAGCCTACTCTTTTGGCTACTCAGCTTATGGATATATTTTCTAATGTGATGAAGCATGATAAAGGTATCCAACAATCGATTCGCTTGGATATTCAGGCATTTAAAGATCGGAATCCTGCTTGTTTGTTATATTGCTCAGCACTTTTATTTATGAAGGGTTACCAGTCTTTGCAAGTATATCGAGTAGCTCACGCTTTGTGGAGGCAGGGACGCAAGGTTTTGGCCGCAGCTTTGCAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCCGCTGCGAAAATTGGGGATGGAATCTTAGTAGATCATGGGACAGGTGTTGTTATTGGTGAAACAGTTATTGTTGGAAGCAGAGTTTCATTGATGCAAGGTGTAACTTTAGGTGGCACGGTAAAGGAAACAGGTGATCGGCATCCCAAAATTTCTGAAGGTGTGCTAATTGGAGCTCATGCAACTATACTTGGGAATATAAGAATTGGTGAATGTGTGATGATAGCTGCTGGCTCTCTTGTGTTACAAGAGGTCCCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGAGCATTATCCATCCTTAACCATGCAGCAAGATGAAAATAAGCATCTTTCGGAGGAGTTTTTTCTATAG 1242 0.413 MSRNKKGLKLKRTSCGISMTTENGTFGCMYLPSSPPFPLFIINNCCTLFLTANTTPPLLYNYNNNGCIDSTLSFFSYLLFSSITMSHLSHKTLVYLPEMRPEHEAEEGQANSLSSISSWPHRLENVFPVYAMGTSNPVLNSSLHISDCLDPIWDVVREEAKLEAEKEPILSSFFHATILSHDCLEEALAFALANRLQKPTLLATQLMDIFSNVMKHDKGIQQSIRLDIQAFKDRNPACLLYCSALLFMKGYQSLQVYRVAHALWRQGRKVLAAALQSRVSEVFGVDIHPAAKIGDGILVDHGTGVVIGETVIVGSRVSLMQGVTLGGTVKETGDRHPKISEGVLIGAHATILGNIRIGECVMIAAGSLVLQEVPPHSIVAGVPAKVIGRVHEHYPSLTMQQDENKHLSEEFFL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0355 413 Pfam Bacterial transferase hexapeptide (six repeats) 336 369 IPR001451 -
Gso2g0355 413 Gene3D Hexapeptide repeat proteins 286 411 - -
Gso2g0355 413 Gene3D serine acetyltransferase, domain 1 136 285 IPR042122 -
Gso2g0355 413 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 87 411 - -
Gso2g0355 413 Pfam Serine acetyltransferase, N-terminal 152 255 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso2g0355 413 CDD LbH_SAT 283 383 IPR045304 -
Gso2g0355 413 PANTHER SERINE ACETYLTRANSFERASE 87 411 - -
Gso2g0355 413 SMART SATase_N_2_a 152 256 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso2g0355 413 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 345 373 IPR018357 GO:0016740
Gso2g0355 413 SUPERFAMILY Trimeric LpxA-like enzymes 152 400 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0355 Gso-Chr2 3882187 3886577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0355 123 412 Miscellaneous Gene Families AT2G17640 67.586 1.56e-130 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0355 K00640 - gmx:100812677 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0355 2 3882187 3886577 Gso16g0956 16 26501157 26504944 GST
Gso1g1369 1 50378225 50382140 Gso2g0355 2 3882187 3886577 PCT
Gso11g0715 11 6360783 6365800 Gso2g0355 2 3882187 3886577 PCT
Gso2g0355 2 3882187 3886577 Gso1g0122 1 1350205 1353469 PCT
Gso2g0355 2 3882187 3886577 Gso9g1724 9 41682424 41684547 PCT