Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0353 ATGGCATCCTCATCTTCTTGTCATGTTACTGAAATAAAACATGATGTCTTTATCAGCTTTAGAGGTACAGACGTCCGCAAAGGTCTGCTTAGCCATTTGAAAACCGAATTGCGCCGCAGACAGATTGATGCCTATGTGGATGAGAGACTTGACAGAGGAGATGAAATATCATCCTCACTTCTCAGAGCAATTGAAGAATCACAAATTTCATTGGTCATATTCTCAAAAGACTATGCTTCATCACAGTGGTGCTTGGAAGAGCTTGCCAAAATGATTGAATCCATGGAAATAAATAAACAGATTGTACTACCTGTTTTCTTCAATGTAGATCCATCACATGTGCGGCACCAATGTGGAGATTATGGAGATGCTTTAGCTAAACATGAAGAAAAACTCAAGGAAAACATGCTCAAGGTAAAGACCTGGAGATCTGCTATGAAAAAAGCGGCTGATTTATCAGGGTTTCATTACCCAACCAATTTTGAGGATGAATCAGATCTTGTCCATGGAATCGTCGAAGACATTTGGGAAAAATTGAGCAAGTTTTGCCCACGTGAATCAAATGGTCTTGTTGGAATTGATCAAAACATTGCACGGATTCAGTCCTTATTGTTAATGGAATCAAGTGAAGTTCTTTTTGTTGGAATTTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCCCGTGCTGTTTTTGATAAATTTTCTTCTCAATACGATGGTTTATGCTTCTTGAATGTAAAAGAAGAGTTGGAACAACATGGATTGAGTCTTTTACGAGAGAAACTTATATCTGAACTATTTGAGGGAGAAGGACTCCATACAAGTGGCACAAGCAAAGCAAGATTCTTGAATTCTTCTATCAGAAGGATGGGTCGGAAAAAAGTTCTGGTTGTGCTCGATGATGTAAATACTTCTGAACAAATAAAAGATCTTGTTGGCGAACCAACTTGCTTTGGTGCAGGGAGTAGAGTGATCATAACAAGTAGAGATCAGAATGTGCTTACGAGTGGGGGTGTTCACCAAATTCATGAGGTCAAGGAAATGGACTCGCGAGATTCCCTCAAACTCTTTTGCTTAAATGCCTTCAATGAAAGCCAACCTAAAATGGGATATGAAAAACTAACTGAAGAGGTAGTTAAAATAGCCCAGGGCATTCCTTTAGCTTTAAGAGTTTTAGGTGCAGATTTCCGTTCCAGAAGCACTATAGACATGTGGGAGTCTGCATTAAGCAAAATCAAGAAGTATCCCAACAAGAAAATTCAGAGTGTGTTACGATTCAGTTTTGATGGACTGGAAGAATTAGAGAAAAAGGCATTTCTAGATATTGCATTCTTTTTCGAAGAAGACAGCAAAGACTACGTTATTACGCAACTGGATGCTTGGGGATTTTATGGTGCTGTAGGGATAGAGGTTCTCCAACGAAAAGCTCTGATAACAATTTCAAAAGACAACAGAATACAAATGCATGACTTGACACGACAAATGGGTTGCGAAATAGTTCGTCAAGAATCTATTACCAATCCAGGAAGACGCAGCCGATTGCGGGATATTGAGGAAGTATACAATGTATTGAGACATGAGCAGGGAACTGATGAGGTGGAAGCCATGCAAATAGATGTGTCTCAAGCTATAGATTTACGTCTGGAATTAAGCACTTTTAAGAAGTTCTCAAACTTTAAAAAGATGCCTCGTCTAAGATTTCTAAAATTTTATCTCCCACTGGATCCTGAGACTGAGCGTTCATTGATGCCGCCAAGCCACGATGGAAACTTTTGGTATTTAGGATGTCAAGTTCCGTTGCTATTATCTGTAGGATGCAAAGAACTCATGACAGTTGCAAGCGAGATTCACGTAAAATGTGTCTACTACCATTTTATTGATGGCTGCTCAGATCCTTCACGACTGAACGAACTTTTAGAAACATCAACAAACTTTGGATGCTATGCAGTGGAAACATTATTGAGGTTATCCATGACGTTGAACGCATCCACTGGGCACCTCAGGAATCTTGAAAGCTCAGATATGCTTGATCAACAATTTTTGACTATGCCTGATGAGCTAATTTGCTTGAGATCTACGTATTATGTTAAGCTTTACAAGAAGACCACGGGACAAGACACCAAGTTACACATTCTATTTGATGGATTTAGGTTTTATGAACGAGTATCTGCCAGGGAGTTGGATAAGGCAGCTGGTGTCCGGGGTGGTATGATGCTGATTCTTTACTGTACAGCTGCTCTCTTTCTATTCCAACTCTTAGAGAGACCCAGGCAGGGTTGGGGGACATTGAGAAAAGGATTGCTCTGGATAGGGATTGTAGCTTTGATCACATATCTGTTGAAACGGACTCGCAGGAAATGGAATCACAATTTTGTCTTGTTCAAGACATTTTGA 2397 0.4001 MASSSSCHVTEIKHDVFISFRGTDVRKGLLSHLKTELRRRQIDAYVDERLDRGDEISSSLLRAIEESQISLVIFSKDYASSQWCLEELAKMIESMEINKQIVLPVFFNVDPSHVRHQCGDYGDALAKHEEKLKENMLKVKTWRSAMKKAADLSGFHYPTNFEDESDLVHGIVEDIWEKLSKFCPRESNGLVGIDQNIARIQSLLLMESSEVLFVGIWGMGGIGKTTIARAVFDKFSSQYDGLCFLNVKEELEQHGLSLLREKLISELFEGEGLHTSGTSKARFLNSSIRRMGRKKVLVVLDDVNTSEQIKDLVGEPTCFGAGSRVIITSRDQNVLTSGGVHQIHEVKEMDSRDSLKLFCLNAFNESQPKMGYEKLTEEVVKIAQGIPLALRVLGADFRSRSTIDMWESALSKIKKYPNKKIQSVLRFSFDGLEELEKKAFLDIAFFFEEDSKDYVITQLDAWGFYGAVGIEVLQRKALITISKDNRIQMHDLTRQMGCEIVRQESITNPGRRSRLRDIEEVYNVLRHEQGTDEVEAMQIDVSQAIDLRLELSTFKKFSNFKKMPRLRFLKFYLPLDPETERSLMPPSHDGNFWYLGCQVPLLLSVGCKELMTVASEIHVKCVYYHFIDGCSDPSRLNELLETSTNFGCYAVETLLRLSMTLNASTGHLRNLESSDMLDQQFLTMPDELICLRSTYYVKLYKKTTGQDTKLHILFDGFRFYERVSARELDKAAGVRGGMMLILYCTAALFLFQLLERPRQGWGTLRKGLLWIGIVALITYLLKRTRRKWNHNFVLFKTF* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0353 798 SMART till_3 13 152 IPR000157 GO:0007165
Gso2g0353 798 PRINTS Disease resistance protein signature 213 228 - -
Gso2g0353 798 PRINTS Disease resistance protein signature 290 304 - -
Gso2g0353 798 PRINTS Disease resistance protein signature 383 397 - -
Gso2g0353 798 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Gso2g0353 798 Pfam TIR domain 13 189 IPR000157 GO:0007165
Gso2g0353 798 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Gso2g0353 798 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Gso2g0353 798 Gene3D - 349 433 IPR042197 -
Gso2g0353 798 Gene3D - 8 179 IPR035897 -
Gso2g0353 798 Gene3D - 180 341 IPR027417 -
Gso2g0353 798 PANTHER NB-ARC DOMAIN PROTEIN 12 576 - -
Gso2g0353 798 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Gso2g0353 798 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Gso2g0353 798 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 576 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0353 Gso-Chr2 3869128 3878172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0353 14 572 WRKY Transcription Factor Family AT4G12020 31.915 1.24e-65 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0353 - - gmx:100812128 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0353 2 3869128 3878172 Gso16g0955 16 26473426 26477014 GST