Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0342 ATGGCTCACAACTCAGACAGTGCCACCTCCAACCTTCTTCTTCTCTGTTCCGAGAACAGCAGCACCTGCTTCGATGATGATGGTTTGGAATGTGATGCCGCAGATGGGTCTAACTCCAGAATCTCGCACCATGAGGGTGGTGGTGGATCGGAGTTGTTGCTGGCGTGTTTTGTGGCGCAGAGTGAGGAAGCTGTGAGGGCTATGGTGGAGAGAGAAAAAGAGCATTTGCCGAGGGATGATTACTTGATGAGGCTGAGGAGTGGGGGGTTGGACTTGGACTTGTTGGGTGTTAGAAAGGAGGCTCTTGATTGGATTTGGAAGGCTCATTCTTATCTTGGATTTGGACCCCTGAGTTTTTGTTTAGCTGTGAACTACTTGGATCGCTTCCTATCGGTTTTTGAGTTACCTAGAGGTGTGAGTTGGACTGTGCAATTGTTGGCTGTAGCTTGCTTGTCGATTGCGGCCAAAATGGAGGAGATCAAAGTGCCTCAATCCGTAGATTTACAGGTTGGGGAACTAAAGTTTTTGTTTGAAGCGAGAACCATTCAAAAAATGGAACTACTTGTATTAAGCACACTGAGATGGAAAATGTGCGCTATAACTCCTTGTTCCTTCATAGACTACTTCCTTGGCAAGATCACTTGCGAGCAGCATCCAGCGAAATCATCCATTTCAATATCAGTGCACCTCATTCTTGGCATAATTAGAGGTATTGATTTCTTGGAATTCTGGCCTTCTGAAATTGCTGCAGCGGTGGCAGCTTCTGTTTTAAAGGAATCACAAGTGATAGAAATTGATAAAGCCATAACCGATCTCTTAGTAGTAGAGAAGGGGAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGATCAATGTTGCTGCTAGTTTAGGCAGCAAGGTGCCATATGTGCCCCAAAGTCCAATTGGGGTGCTGGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACTGTTGGATCATCATGTCCAAACTCGTCACATAATACTTCAAACCCAAACCCTACTAAGAGGAGCAAACCAGATGAACCTTCTAATGGAACCTCCAATTCATGA 1083 0.4469 MAHNSDSATSNLLLLCSENSSTCFDDDGLECDAADGSNSRISHHEGGGGSELLLACFVAQSEEAVRAMVEREKEHLPRDDYLMRLRSGGLDLDLLGVRKEALDWIWKAHSYLGFGPLSFCLAVNYLDRFLSVFELPRGVSWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGELKFLFEARTIQKMELLVLSTLRWKMCAITPCSFIDYFLGKITCEQHPAKSSISISVHLILGIIRGIDFLEFWPSEIAAAVAASVLKESQVIEIDKAITDLLVVEKGRVLKCVELIRDLSLINVAASLGSKVPYVPQSPIGVLDAGCLSYKSDELTVGSSCPNSSHNTSNPNPTKRSKPDEPSNGTSNS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0342 360 MobiDBLite consensus disorder prediction 327 360 - -
Gso2g0342 360 SUPERFAMILY Cyclin-like 57 197 IPR036915 -
Gso2g0342 360 CDD CYCLIN 98 190 IPR013763 -
Gso2g0342 360 Gene3D - 67 285 - -
Gso2g0342 360 Gene3D - 78 198 - -
Gso2g0342 360 Pfam Cyclin, C-terminal domain 200 291 IPR004367 -
Gso2g0342 360 SMART cyclin_7 103 191 IPR013763 -
Gso2g0342 360 Pfam Cyclin, N-terminal domain 65 198 IPR006671 -
Gso2g0342 360 PANTHER CYCLIN-D4-1-LIKE 54 342 - -
Gso2g0342 360 PANTHER CYCLINS 54 342 IPR039361 -
Gso2g0342 360 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0342 Gso-Chr2 3732857 3735512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0342 12 268 Core Cell Cycle Gene Families AT5G65420 52.326 8.89e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0342 K18810 - gmx:100794010 579.326