Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0330 ATGTTCGGACCAACCCAAACCGCTTCCCAACCTCCGAAATCCACTCTCAAATTCCTCTGCAGCTACGGCGGCAAAATTCTCCCCCGCTACCCCGACGGCAAGCTCCGTTACCTCGGCGGCCATACCCGCGTCCTCGCCGTCGATCGCTCCATTCCATTCTCCGAGCTATTGCTGAAGCTGGAGGAGCTCTGCGGCGCCTCCGTGAGGTACCTCCGCTGCCAATTACCTTCCGAAGACCTCGACGCTCTCGTCTCCATCACCTCCGACGAGGATCTCGCAAACCTCATCGAGGAATACGATCGCGTTTCATCGCTGAAAATCAGAGCCTTCCTCTCGCCGCCGACGCCGCCGAGATCGCCGTCGCTTAAGGTTTCCACTCCTCCGTCGAAATCGGCGTCCATCTCTTCCTCCTCTGCTTCGTCGTCGTCCTCGTCCTCGTCGTATTGCAGCCCTACCGGCGCCAGTGACTCTGGCCGGAGGTATAGAGCTCCGGCGCCGGTGTCAGACCGCTGCGTACATCAGATGTCGCCGTCGCCGGCGGCGTATCCGGTCGGCGTGGAGAAATCGAAATCCTCCGGGAGGAATATTCCTCTGCCGCGGTACGGTGGCCACGTTTATATGATCCACAACGGGAACCACTGGCAATAG 648 0.6003 MFGPTQTASQPPKSTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSIPFSELLLKLEELCGASVRYLRCQLPSEDLDALVSITSDEDLANLIEEYDRVSSLKIRAFLSPPTPPRSPSLKVSTPPSKSASISSSSASSSSSSSSYCSPTGASDSGRRYRAPAPVSDRCVHQMSPSPAAYPVGVEKSKSSGRNIPLPRYGGHVYMIHNGNHWQ* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0330 215 PANTHER OS05G0427100 PROTEIN-RELATED 7 214 - -
Gso2g0330 215 SMART PB1_new 30 114 IPR000270 GO:0005515
Gso2g0330 215 MobiDBLite consensus disorder prediction 114 193 - -
Gso2g0330 215 MobiDBLite consensus disorder prediction 124 154 - -
Gso2g0330 215 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 7 214 - -
Gso2g0330 215 SUPERFAMILY CAD & PB1 domains 32 118 - -
Gso2g0330 215 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Gso2g0330 215 CDD PB1_UP2 19 111 - -
Gso2g0330 215 Gene3D - 34 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0330 Gso-Chr2 3566986 3569026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0330 16 111 MAP Kinase Kinase Kinase AT5G57610 52.475 3.08e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0330 - - gmx:100815157 389.808