Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g0319 ATGAAAATGACAAGGATCTTCCTTAGCACCCTTTCCCTGTGCCTCTTGCTCCTCCAGCTGAATCTCTCCAAGGCCCAGCCTGGATCTCCCCAAAAACTTCCATTTACATTTCATTCTCTATTTCCATTTTTCGGCCGTCCAGAAGACGCCAACATACCACTAAAGGGTCCACAGGACGACCTTCAGAACGTGCCTCAACAGGCCGCCGACCAAAAACCTCAGAAACTCAGCCCAGATTTCTACATAAAAACTTGCCCCAATGCCCAAAAAATCGTGGCCGATGCACTTGCAGACATCGTTAAGAAGAATCCCGGCGCTCTCGGAAACCTACTTCGCCTTCAATTCCATGACTGCTTCGTTAATGGATGCGATGCATCGATCTTGCTAGATTACTCGCCAAGCGGTGACACCGTGGAGAAAAGTTCAATGGTGAATGGTCTACTCCTGAAAGGAGCTGATATGATCGATGACATAAAGTTGAAGCTGGAGGAGCAGTGTCCTCAAACTGTGTCATGTGCTGACACATTGGCATTTACAGCCAACGAGGTAATGACCATGGCGGGTTTGCCCCCTCGGAAACCCCTCGGTGGCCGTAGAGACGCGCTGGTTTCCCTTTCCAGTGCGGCAGACGCCGACAACCTCCCTTTGCCAGACTGGACCATGGATCAAATGGTAAAACTCTTCACCAAAAAGGGCTTCAACATCGAAGAAATGGTGATCCTACTCGGTGCACATTCTATCGGCATGGCTCATTGTGACTTGTTCATCCAAAGGGCATACAACTTCCAAAACACAGGGAAACCCGACCCTACCCTTACCGTCGAAGCGGTTGAGGAATTCAAAAAGGCATGCCCCAATGTTAATACACCTAAGTACAGGAACCCCCCTGTCAACTTTGATGCAACACCAACTGTGCTTGATAACCTCTTCTACATGGAAATGGTCGAGAGAAACAGAACTTTTCTCATTACGGATTCCCATTTGTTGACAGATCAGAGGACTTTGCCACTTGTGCAACAGTTTGCACATGACCCTAGCTTGTTCCCCAGGAGATTTCCTGAGGTCATGCTTAAGCTCGGTTCTTTGAATGTCCTCACAGGGAATGAAGGCGAGATCAGGAAGATTTGTAGGTCCACCAATTAA 1143 0.4838 MKMTRIFLSTLSLCLLLLQLNLSKAQPGSPQKLPFTFHSLFPFFGRPEDANIPLKGPQDDLQNVPQQAADQKPQKLSPDFYIKTCPNAQKIVADALADIVKKNPGALGNLLRLQFHDCFVNGCDASILLDYSPSGDTVEKSSMVNGLLLKGADMIDDIKLKLEEQCPQTVSCADTLAFTANEVMTMAGLPPRKPLGGRRDALVSLSSAADADNLPLPDWTMDQMVKLFTKKGFNIEEMVILLGAHSIGMAHCDLFIQRAYNFQNTGKPDPTLTVEAVEEFKKACPNVNTPKYRNPPVNFDATPTVLDNLFYMEMVERNRTFLITDSHLLTDQRTLPLVQQFAHDPSLFPRRFPEVMLKLGSLNVLTGNEGEIRKICRSTN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g0319 380 PANTHER PEROXIDASE 26 378 - -
Gso2g0319 380 Gene3D - 79 380 - -
Gso2g0319 380 Gene3D Peroxidase, domain 2 215 359 - -
Gso2g0319 380 Pfam Peroxidase 93 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 SUPERFAMILY Heme-dependent peroxidases 76 380 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 CDD secretory_peroxidase 75 379 IPR033905 GO:0004601|GO:0042744
Gso2g0319 380 PRINTS Haem peroxidase superfamily signature 107 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Haem peroxidase superfamily signature 188 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 ProSiteProfiles Plant heme peroxidase family profile. 75 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 ProSitePatterns Peroxidases proximal heme-ligand signature. 237 247 IPR019793 -
Gso2g0319 380 PRINTS Plant peroxidase signature 85 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 109 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 150 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 169 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 236 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 297 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PRINTS Plant peroxidase signature 354 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso2g0319 380 PANTHER PEROXIDASE 25-RELATED 26 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g0319 Gso-Chr2 3447764 3449311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g0319 75 380 Peroxidase AT4G08770 40.514 2.44e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g0319 K00430 - gmx:100783807 733.021